RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 RIGQ13278 110 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 OR5A1Q8NGJ0 315 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 TM4SF18Q96CE8 201 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 TRBV7-9A0A0J9YWB2 115 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 MPTX1A8MV57 137 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 IGHA1P01876 353 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 RPL34P49207 117 aaKnown RBP7.5□□□□□ -1.21
SYNE1-206ENST00000367253 TMEM30BQ3MIR4 351 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 SLC25A26Q70HW3 274 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 MAVSQ7Z434 540 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 C5orf17Q8NAS9 161 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 OR8A1Q8NGG7 326 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 ST6GALNAC6Q969X2 333 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 METTL26Q96S19 204 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 FGF20Q9NP95 211 aaPredicted RBP7.5□□□□□ -1.21
SYNE1-206ENST00000367253 CREBBPQ92793 2442 aa7.5□□□□□ -1.21
SYNE1-206ENST00000367253 IGHV3OR16-12A0A075B7B8 117 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 IGHV3-64DA0A0J9YX35 117 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 EMDP50402 254 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 LIMS2Q7Z4I7 341 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 FDCSPQ8NFU4 85 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 HIST1H2BAQ96A08 127 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 CROCCQ5TZA2 2017 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 A0A0G2JMM0 328 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 A0A1W2PPB8 328 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 KIR3DP1A8MWS1 328 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 SNURFLB1AK76 121 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 GATA3P23771 443 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 CD226Q15762 336 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 DNM1P46Q6ZS02 220 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 OR4D11Q8NGI4 311 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 OR10G9Q8NGN4 311 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 OR10G7Q8NGN6 311 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 MYOZ3Q8TDC0 251 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 CXCL16Q9H2A7 254 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 SLC25A22Q9H936 323 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 BEX4Q9NWD9 120 aaPredicted RBP7.49□□□□□ -1.21
SYNE1-206ENST00000367253 FZR1Q9UM11 496 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 PPIAL4CA0A0B4J2A2 164 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 TRDCB7Z8K6 153 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 F5H768 121 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 PPIAL4GP0DN37 164 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 ATP5G2Q06055 141 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 OR4S2Q8NH73 311 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 BRK1Q8WUW1 75 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 SLC17A2O00624 439 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 SFT2D2O95562 160 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 DERL3Q96Q80 235 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 CHST6Q9GZX3 395 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 GLIPR2Q9H4G4 154 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 DOCK5Q9H7D0 1870 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 TRIP12Q14669 1992 aaPredicted RBP7.49□□□□□ -1.21
SYNE1-206ENST00000367253 CUL9Q8IWT3 2517 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 SCN10AQ9Y5Y9 1956 aa7.49□□□□□ -1.21
SYNE1-206ENST00000367253 PMELP40967 661 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 OPRK1P41145 380 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 FOXL1Q12952 345 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 C3AR1Q16581 482 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 PPP1R32Q7Z5V6 425 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 AMER3Q8N944 861 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 OR1K1Q8NGR3 316 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 VAX2Q9UIW0 290 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 ZC3H12DA2A288 527 aaKnown RBP7.48□□□□□ -1.21
SYNE1-206ENST00000367253 IGHA2P01877 340 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 NMBP08949 121 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 LMO1P25800 156 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 SLC35E3Q7Z769 313 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 CRIM1Q9NZV1 1036 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 PARP14Q460N5 1801 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 RLFQ13129 1914 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 ZNF815PA8K554 130 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 H3BMH7 237 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 TRGC1P0CF51 173 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 CA6P23280 308 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 ACVR1Q04771 509 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 WFDC5Q8TCV5 224 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 GPR84Q9NQS5 396 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 SLC17A5Q9NRA2 495 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 ABCA1O95477 2261 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 A0A1W2PQM1 296 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 APCSP02743 223 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 WNT1P04628 370 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 LTBRP36941 435 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 CD69Q07108 199 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 PFN4Q8NHR9 129 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 SPACA5Q96QH8 159 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 SSBP4Q9BWG4 385 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-206ENST00000367253 QTRT1Q9BXR0 403 aaKnown RBP7.48□□□□□ -1.21
SYNE1-206ENST00000367253 MTFP1Q9UDX5 166 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 VSIG4Q9Y279 399 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 ZNF257Q9Y2Q1 563 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 TSSC4Q9Y5U2 329 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-206ENST00000367253 ARRDC5A6NEK1 342 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 IL4P05112 153 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 CCL8P80075 99 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 ZNF141Q15928 474 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 DLEU7Q6UYE1 221 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 NFAM1Q8NET5 270 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms