RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 MBNL3Q9NUK0 354 aaKnown RBP12.36□□□□□ -0.43
PRKN-204ENST00000366896 CACNG5Q9UF02 275 aa12.36□□□□□ -0.43
PRKN-204ENST00000366896 CA6P23280 308 aa12.36□□□□□ -0.43
PRKN-204ENST00000366896 PLGLB1Q02325 96 aa12.36□□□□□ -0.43
PRKN-204ENST00000366896 ZNF497Q6ZNH5 498 aa12.36□□□□□ -0.43
PRKN-204ENST00000366896 TMEM251Q8N6I4 163 aa12.36□□□□□ -0.43
PRKN-204ENST00000366896 CACNA1GO43497 2377 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 IGKV1D-33P01593 117 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 IGKV1-33P01594 117 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 SRP14P37108 136 aaKnown RBP12.35□□□□□ -0.43
PRKN-204ENST00000366896 CNN1P51911 297 aaKnown RBP12.35□□□□□ -0.43
PRKN-204ENST00000366896 ERVK11-1P61568 191 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 PRSS8Q16651 343 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 CYB5R2Q6BCY4 276 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 FAM180AQ6UWF9 173 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 Q6ZS92 163 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 RBMXL3Q8N7X1 1067 aaKnown RBP12.35□□□□□ -0.43
PRKN-204ENST00000366896 NANOS1Q8WY41 292 aaKnown RBP12.35□□□□□ -0.43
PRKN-204ENST00000366896 TAF15Q92804 592 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRKN-204ENST00000366896 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 FKBP11Q9NYL4 201 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 PPP1R3CQ9UQK1 317 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 POLR3KQ9Y2Y1 108 aaPredicted RBP12.35□□□□□ -0.43
PRKN-204ENST00000366896 WIPI2Q9Y4P8 454 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 TIMM9Q9Y5J7 89 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 ESPL1Q14674 2120 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 IGKV1-5P01602 117 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
PRKN-204ENST00000366896 PSMB3P49720 205 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 ZNF585BQ52M93 769 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 C12orf49Q9H741 205 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 POLDIP2Q9Y2S7 368 aa12.35□□□□□ -0.43
PRKN-204ENST00000366896 A0A1W2PR80 420 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 RNF212BA8MTL3 300 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 PMP22Q01453 160 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 ZBTB34Q8NCN2 500 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 OR1K1Q8NGR3 316 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 RTL8AQ9BWD3 113 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 DOCK7Q96N67 2140 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 SIRPB1O00241 398 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 SCGB1D1O95968 90 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 ZNF146Q15072 292 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 RNFT1Q5M7Z0 435 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 WDR86Q86TI4 376 aa12.34□□□□□ -0.43
PRKN-204ENST00000366896 BCL2L2Q92843 193 aaPredicted RBP12.34□□□□□ -0.43
PRKN-204ENST00000366896 IGHV3-64DA0A0J9YX35 117 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 MARCH11A6NNE9 402 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 GYPAP02724 150 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 ZNF16P17020 682 aaPredicted RBP12.33□□□□□ -0.44
PRKN-204ENST00000366896 DNAJC13O75165 2243 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 IFNL4K9M1U5 179 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 VENTXO95231 258 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 LCN2P80188 198 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 TLE1Q04724 770 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 MSMO1Q15800 293 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 MCEMP1Q8IX19 187 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 NAGKQ9UJ70 344 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 KCNS2Q9ULS6 477 aa12.33□□□□□ -0.44
PRKN-204ENST00000366896 UBE2L5PA0A1B0GUS4 154 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 SOX15O60248 233 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 OR10J1P30954 320 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 KCNIP4Q6PIL6 250 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 MRPL52Q86TS9 123 aaKnown RBP12.32□□□□□ -0.44
PRKN-204ENST00000366896 MDP1Q86V88 176 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 OR4F5Q8NH21 305 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 WFIKKN1Q96NZ8 548 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 PRORYQ9H606 182 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 MANBALQ9NQG1 85 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 MED12LQ86YW9 2145 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 CTXND1A0A1B0GTU2 59 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 M0QZK8 103 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 OR2H2O95918 312 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 FAM87AP0C7U9 286 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 RPL15P61313 204 aaKnown RBP12.32□□□□□ -0.44
PRKN-204ENST00000366896 SLC38A11Q08AI6 406 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 ACSM6Q6P461 480 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 IMMP2LQ96T52 175 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 ZDHHC11Q9H8X9 412 aa12.32□□□□□ -0.44
PRKN-204ENST00000366896 ARHGAP21Q5T5U3 1957 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 DLEU1O43261 78 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 ATP6V1FQ16864 119 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 SPANXN5Q5MJ07 72 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 FBXW9Q5XUX1 488 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 TMEM208Q9BTX3 173 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 SLC25A22Q9H936 323 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 TRAPPC2LQ9UL33 140 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 HMGB3O15347 200 aaKnown RBP12.31□□□□□ -0.44
PRKN-204ENST00000366896 WDR1O75083 606 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 MBP02144 154 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 IL3RAP26951 378 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 DRAM1Q8N682 238 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 GATAD1Q8WUU5 269 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 TAAR6Q96RI8 345 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 ZNF71Q9NQZ8 489 aaPredicted RBP12.31□□□□□ -0.44
PRKN-204ENST00000366896 HSPB7Q9UBY9 170 aa12.31□□□□□ -0.44
PRKN-204ENST00000366896 RBM7Q9Y580 266 aaKnown RBP12.31□□□□□ -0.44
PRKN-204ENST00000366896 CRYABP02511 175 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms