RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 KIAA1324LA8MWY0 1029 aaPredicted RBP16.58■□□□□ 0.24
TRIM58-201ENST00000366481 FCN1O00602 326 aa16.58■□□□□ 0.24
TRIM58-201ENST00000366481 ATP5G3P48201 142 aa16.58■□□□□ 0.24
TRIM58-201ENST00000366481 DCHS1Q96JQ0 3298 aa16.58■□□□□ 0.24
TRIM58-201ENST00000366481 SIRPB1O00241 398 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 PMCHP20382 165 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 SOX8P57073 446 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 TFF3Q07654 80 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 LINC01551Q86U37 167 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 MED12LQ86YW9 2145 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 OR10P1Q8NGE3 313 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 SLC35E1Q96K37 410 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 Q6ZSR3 168 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 HIPK2Q9H2X6 1198 aa16.57■□□□□ 0.24
TRIM58-201ENST00000366481 TRAV38-1A0A0B4J264 116 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 NTN3O00634 580 aaPredicted RBP16.56■□□□□ 0.24
TRIM58-201ENST00000366481 RHBDL1O75783 438 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 IER3P46695 156 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 EDDM3BP56851 147 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 ASCL4Q6XD76 172 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 ZFP30Q9Y2G7 519 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 DIRC3C9JPN6 131 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 IGKV1-5P01602 117 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 CRYABP02511 175 aaKnown RBP16.56■□□□□ 0.24
TRIM58-201ENST00000366481 TYMSP04818 313 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 CDC34P49427 236 aaPredicted RBP16.56■□□□□ 0.24
TRIM58-201ENST00000366481 HNRNPA3P51991 378 aaKnown RBP16.56■□□□□ 0.24
TRIM58-201ENST00000366481 PCBD1P61457 104 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 ZNF816Q0VGE8 651 aaPredicted RBP16.56■□□□□ 0.24
TRIM58-201ENST00000366481 TECTBQ96PL2 329 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 LOXL2Q9Y4K0 774 aa16.56■□□□□ 0.24
TRIM58-201ENST00000366481 TPRP12270 2363 aaKnown RBP16.55■□□□□ 0.24
TRIM58-201ENST00000366481 POLEQ07864 2286 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 OR5G3P0C626 314 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 Q6ZVH6 145 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 IL6RP08887 468 aaPredicted RBP16.55■□□□□ 0.24
TRIM58-201ENST00000366481 RPL15P61313 204 aaKnown RBP16.55■□□□□ 0.24
TRIM58-201ENST00000366481 PAFAH1B2P68402 229 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 DCAF12Q5T6F0 453 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 C1orf210Q8IVY1 113 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 KCNE4Q8WWG9 221 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 STARD4Q96DR4 205 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 C20orf144Q9BQM9 153 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 MRPL18Q9H0U6 180 aaKnown RBP16.55■□□□□ 0.24
TRIM58-201ENST00000366481 ZNF586Q9NXT0 402 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 SLC17A3O00476 420 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 VENTXO95231 258 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 IGKV1-39P01597 117 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 IGKV1D-39P04432 117 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 NPPCP23582 126 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 SPATA45Q537H7 98 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 FAM53AQ6NSI3 398 aaPredicted RBP16.55■□□□□ 0.24
TRIM58-201ENST00000366481 ZNF808Q8N4W9 903 aaPredicted RBP16.55■□□□□ 0.24
TRIM58-201ENST00000366481 ZNF114Q8NC26 417 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 SFRP2Q96HF1 295 aa16.55■□□□□ 0.24
TRIM58-201ENST00000366481 AMTP48728 403 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 GCSAMLQ5JQS6 135 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 TPTE2P1Q5T6R2 138 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 ATOH7Q8N100 152 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 IL36GQ9NZH8 169 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 TRAPPC2LQ9UL33 140 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 WIPI2Q9Y4P8 454 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 SLC25A6P12236 298 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 CA6P23280 308 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 HTD2P86397 168 aa16.54■□□□□ 0.24
TRIM58-201ENST00000366481 RNASE8Q8TDE3 154 aaKnown RBP16.54■□□□□ 0.24
TRIM58-201ENST00000366481 F2Z2F3 143 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 HINT1P49773 126 aaPredicted RBP16.53■□□□□ 0.24
TRIM58-201ENST00000366481 GNB1P62873 340 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 KIAA1644Q3SXP7 199 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 USF3Q68DE3 2245 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 FGFRL1Q8N441 504 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 OR10G8Q8NGN5 311 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 ACACAQ13085 2346 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 NTF3P20783 257 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 G6PCP35575 357 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 C22orf15Q8WYQ4 148 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 TMEM147Q9BVK8 224 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 C1QTNF5Q9BXJ0 243 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 ELOVL5Q9NYP7 299 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 PCNX1Q96RV3 2341 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 PIGBOS1A0A0B4J2F0 54 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 GFRA1P56159 465 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 SLC35B1P78383 322 aa16.53■□□□□ 0.24
TRIM58-201ENST00000366481 SNURFLB1AK76 121 aa16.52■□□□□ 0.24
TRIM58-201ENST00000366481 TFF1P04155 84 aa16.52■□□□□ 0.24
TRIM58-201ENST00000366481 FGF12P61328 243 aa16.52■□□□□ 0.24
TRIM58-201ENST00000366481 LEMD1Q68G75 181 aa16.52■□□□□ 0.24
TRIM58-201ENST00000366481 OR1L6Q8NGR2 347 aa16.52■□□□□ 0.24
TRIM58-201ENST00000366481 WNT10AQ9GZT5 417 aa16.52■□□□□ 0.24
TRIM58-201ENST00000366481 STPG4Q8N801 248 aa16.52■□□□□ 0.23
TRIM58-201ENST00000366481 OR5P3Q8WZ94 311 aa16.52■□□□□ 0.23
TRIM58-201ENST00000366481 REPIN1Q9BWE0 567 aaKnown RBP16.52■□□□□ 0.23
TRIM58-201ENST00000366481 LIN7CQ9NUP9 197 aaKnown RBP16.52■□□□□ 0.23
TRIM58-201ENST00000366481 LNP1A1A4G5 178 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 RBFOX2O43251 390 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRIM58-201ENST00000366481 PLGLB1Q02325 96 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 C6orf15Q6UXA7 325 aaPredicted RBP16.51■□□□□ 0.23
TRIM58-201ENST00000366481 CENPVQ7Z7K6 275 aaPredicted RBP16.51■□□□□ 0.23
TRIM58-201ENST00000366481 CBY3A6NI87 242 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms