RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 RBBP9O75884 186 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 CRYZL1O95825 349 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 HTR1AP08908 422 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 HOXB6P17509 224 aaKnown RBP6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 RAB3AP20336 220 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 POLR2IP36954 125 aaKnown RBP6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 MFAP2P55001 183 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 APOC4P55056 127 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 GNG2P59768 71 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 S100A12P80511 92 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 HTD2P86397 168 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 MPV17LQ2QL34 196 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 ODF3L2Q3SX64 289 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 SLC22A6Q4U2R8 563 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 LY6G6FQ5SQ64 297 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 RAB12Q6IQ22 244 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 BTNL8Q6UX41 500 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 STX19Q8N4C7 294 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 UXS1Q8NBZ7 420 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 TRUB1Q8WWH5 349 aaKnown RBP6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 PDCD1LG2Q9BQ51 273 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 AGMATQ9BSE5 352 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 METTL9Q9H1A3 318 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 MAP6D1Q9H9H5 199 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 ISG20L2Q9H9L3 353 aaKnown RBP6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 AP5S1Q9NUS5 200 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 ERVK13-1Q9NX77 482 aa6.2□□□□□ -1.42
HMGB1P39-201ENST00000366304 KIR2DL5BA0A0G2JN68 375 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 KIR2DL5BA0A0G2JPC4 375 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 TCRBV3S1A0A5B6 114 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 CCDC160A6NGH7 325 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 FAM90A7PA6NKC0 464 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 SRRM4A7MD48 611 aaKnown RBP6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 J3QLW9 94 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 GNGT2O14610 69 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 B3GALNT1O75752 331 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 IGHV3-23P01764 117 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 IFNA4P05014 189 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 ZNF19P17023 458 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 SOX2P48431 317 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 TCTAP57738 103 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 RPS16P62249 146 aaKnown RBP6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 KIR3DS1Q14943 382 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 C6orf141Q5SZD1 244 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 C1orf146Q5VVC0 180 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 FAM71F2Q6NXP2 309 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 Q6ZR54 194 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 LINC00596Q86U02 117 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 KIR2DL5AQ8N109 375 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 STPG3Q8N7X2 389 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR2AK2Q8NG84 335 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 KIR2DL5BQ8NHK3 375 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 C4orf36Q96KX1 117 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 RNF5Q99942 180 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 SCRT1Q9BWW7 348 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 RBM38Q9H0Z9 239 aaKnown RBP6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 C11orf68Q9H3H3 251 aaKnown RBP6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 SCRT2Q9NQ03 307 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 PRR13Q9NZ81 148 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 AP4S1Q9Y587 144 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 PEX16Q9Y5Y5 336 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 S4R3C0 116 aa6.19□□□□□ -1.42
HMGB1P39-201ENST00000366304 IGHV4-4A0A075B6R2 117 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 MCRIP1C9JLW8 97 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 RAB29O14966 203 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 SPDEFO95238 335 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 BAG2O95816 211 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 MC5RP33032 325 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 LGALS7P47929 136 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 ATP5G2Q06055 141 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 HMGN3Q15651 99 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 TRAT1Q6PIZ9 186 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 UNQ9165/PRO28630Q6UXU0 137 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 IZUMO2Q6UXV1 221 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 ARL6IP6Q8N6S5 226 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 LINC00469Q8N7U9 141 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 NRG4Q8WWG1 115 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 CCDC140Q96MF4 163 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR14A2Q96R54 314 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 TSNAXQ99598 290 aaKnown RBP6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 MFFQ9GZY8 342 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 BANF2Q9H503 90 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 C12orf4Q9NQ89 552 aa6.18□□□□□ -1.42
HMGB1P39-201ENST00000366304 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 DAPL1A0PJW8 107 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 FAM223BA6NKX1 122 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 A8MWP6 167 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 CASQ2O14958 399 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 GGCTO75223 188 aaKnown RBP6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR2J3O76001 311 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR9G9P0C7N8 305 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 GTF2F2P13984 249 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 CPEP16870 476 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 ZNF93P35789 620 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 ATP6V1E1P36543 226 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 C15orf32Q32M92 178 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 DDI2Q5TDH0 399 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 GPR141Q7Z602 305 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 GPHB5Q86YW7 130 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms