RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 MED13LQ71F56 2210 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 SERTM2A0A1B0GWG4 89 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 MMP9P14780 707 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 NDUFA6P56556 154 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 ZNF345Q14585 488 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 LY6EQ16553 131 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 SLC25A15Q9Y619 301 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 KBTBD11-OT1A0A1B0GTJ5 212 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 KCNAB3O43448 404 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 MEF2CQ06413 473 aaPredicted RBP11.71□□□□□ -0.53
CTR9-201ENST00000361367 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 RPL39P5Q59GN2 51 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 TMEM88Q6PEY1 159 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 ZNF439Q8NDP4 499 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 ST6GALNAC3Q8NDV1 305 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 OR10C1Q96KK4 312 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 P2RX4Q99571 388 aa11.71□□□□□ -0.53
CTR9-201ENST00000361367 GAMTQ14353 236 aa11.71□□□□□ -0.54
CTR9-201ENST00000361367 AP1S3Q96PC3 154 aa11.71□□□□□ -0.54
CTR9-201ENST00000361367 CEACAM18A8MTB9 384 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 PPP1R2P9O14990 202 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 DEDDO75618 318 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 KBTBD11O94819 623 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 GNG4P50150 75 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 PLAURQ03405 335 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 LRP11Q86VZ4 500 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 IL22RA2Q969J5 263 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 DPM3Q9P2X0 92 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 LYNX1G3V0Z9 82 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 CORTO00230 105 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
CTR9-201ENST00000361367 SEC11BP0C7V7 166 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 LYNX1P0DP58 116 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 TDGF1P13385 188 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 TMEM241Q24JQ0 296 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 AARDQ4LEZ3 155 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 DNM1P46Q6ZS02 220 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 VKORC1L1Q8N0U8 176 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 FAM222BQ8WU58 562 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 RBKSQ9H477 322 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 LTBP2Q14767 1821 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 NOTCH2Q04721 2471 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 SLC35B1P78383 322 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 CREBBPQ92793 2442 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 HELZP42694 1942 aaKnown RBP11.7□□□□□ -0.54
CTR9-201ENST00000361367 RBFOX3A6NFN3 312 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 FAM90A26D6RGX4 464 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 PITX3O75364 302 aa11.7□□□□□ -0.54
CTR9-201ENST00000361367 MYPOPQ86VE0 399 aaPredicted RBP11.7□□□□□ -0.54
CTR9-201ENST00000361367 SDHCQ99643 169 aaPredicted RBP11.7□□□□□ -0.54
CTR9-201ENST00000361367 IGHV1-46P01743 117 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 RUNX1Q01196 453 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 SSX7Q7RTT5 188 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 PLPPR1Q8TBJ4 325 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 TCF19Q9Y242 345 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 LINC00312Q9Y6C7 94 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 PTBP3O95758 552 aaKnown RBP11.69□□□□□ -0.54
CTR9-201ENST00000361367 CA7P43166 264 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 PRR30Q53SZ7 412 aaPredicted RBP11.69□□□□□ -0.54
CTR9-201ENST00000361367 CHAC2Q8WUX2 184 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
CTR9-201ENST00000361367 TMEM8BA6NDV4 472 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 OR10J1P30954 320 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 TNFRSF9Q07011 255 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 TMEM187Q14656 261 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 IGFL3Q6UXB1 125 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 TMEM208Q9BTX3 173 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 PROB1E7EW31 1015 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 G3V3Q6 166 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 SLC35E3Q7Z769 313 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 OR52M1Q8NGK5 317 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 MRPL30Q8TCC3 161 aaKnown RBP11.69□□□□□ -0.54
CTR9-201ENST00000361367 WDR61Q9GZS3 305 aaKnown RBP11.69□□□□□ -0.54
CTR9-201ENST00000361367 TUBD1Q9UJT1 453 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 PTPRQQ9UMZ3 2332 aa11.69□□□□□ -0.54
CTR9-201ENST00000361367 C20orf202A1L168 122 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 PPOXP50336 477 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 LOXL3P58215 753 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 HIST3H3Q16695 136 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 OR2T10Q8NGZ9 312 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 LSM10Q969L4 123 aaKnown RBP11.68□□□□□ -0.54
CTR9-201ENST00000361367 MANBALQ9NQG1 85 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 OTOGLQ3ZCN5 2332 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 CTXND1A0A1B0GTU2 59 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 C11orf94C9JXX5 98 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 S100A8P05109 93 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 CCL3L1P16619 93 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 PROK2Q9HC23 129 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 ETV2O00321 342 aaPredicted RBP11.68□□□□□ -0.54
CTR9-201ENST00000361367 TGFAP01135 160 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 THBDP07204 575 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 ZNF474Q6S9Z5 364 aaPredicted RBP11.68□□□□□ -0.54
CTR9-201ENST00000361367 RSRP1Q9BUV0 290 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms