RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 WDR54Q9H977 334 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 IGLV3-27P01718 113 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 PF4P02776 101 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 TMPRSS3P57727 454 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 HIST1H1AQ02539 215 aaPredicted RBP11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 TMEM177Q53S58 311 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF362Q5T0B9 420 aaPredicted RBP11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 RBKSQ9H477 322 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 CCL2P13500 99 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 HKR1P10072 659 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 ERGP11308 486 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 ST6GALNAC6Q969X2 333 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 TRAV8-6A0A0B4J262 113 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 KLK15Q9H2R5 256 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 FNDC4Q9H6D8 234 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 SNAI2O43623 268 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 PNLIPP16233 465 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 TUBA4BQ9H853 241 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 HCSTQ9UBK5 93 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 TRBV5-4A0A0C4DH59 114 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 A0A1W2PQD3 144 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 CEACAM18A8MTB9 384 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 PIGYQ3MUY2 71 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 MMD2Q8IY49 270 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 KIR3DL3Q8N743 410 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 ASB10Q8WXI3 467 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 CXorf66Q5JRM2 361 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 OR8G5Q8NG78 346 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 GCM2O75603 506 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 STARD6P59095 220 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 RND3P61587 244 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 FSCN3Q9NQT6 498 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 WNK1Q9H4A3 2382 aa11.48□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF236Q9UL36 1845 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 CBLN1P23435 193 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 TGFAP01135 160 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 DSPPQ9NZW4 1301 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 ARL14EPLP0DKL9 152 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 SSBP4Q9BWG4 385 aaPredicted RBP11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 J3QT63 122 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 CEACAM5P06731 702 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 SSC4DQ8WTU2 575 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 TNRC6CQ9HCJ0 1690 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 ASAH2BP0C7U1 165 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 EFNB2P52799 333 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 TMEM240Q5SV17 173 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 GCSAMQ8N6F7 178 aa11.47□□□□□ -0.57
SRGAP3-201ENST00000360413 GDF9O60383 454 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 SNRPCP09234 159 aaKnown RBP11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 DTX1Q86Y01 620 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 LRTM2Q8N967 370 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 TMEM190Q8WZ59 177 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 PGLYRP3Q96LB9 341 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 GFRA1P56159 465 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF324BQ6AW86 544 aaPredicted RBP11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 MFAP4P55083 255 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 IRF3Q14653 427 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 MOGAT3Q86VF5 341 aa11.46□□□□□ -0.57
SRGAP3-201ENST00000360413 NUBP1P53384 320 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 CHST5Q9GZS9 411 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 PRSS23O95084 383 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 KCNS1Q96KK3 526 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 OR11H12B2RN74 326 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 OR11H1Q8NG94 326 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 OR11H2Q8NH07 326 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 GPR82Q96P67 336 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 FOXQ1Q9C009 403 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 PPP1R3EQ9H7J1 279 aa11.46□□□□□ -0.58
SRGAP3-201ENST00000360413 PRRT4C9JH25 899 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 H3BUT2 72 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 CCL21O00585 134 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 DNM1P46Q6ZS02 220 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 JMJD8Q96S16 334 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 LHX9Q9NQ69 397 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 TNFRSF19Q9NS68 423 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 PRSS12P56730 875 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM159AQ6UWV7 190 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 AICDAQ9GZX7 198 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 FOXD3Q9UJU5 478 aaPredicted RBP11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 DCTN5Q9BTE1 182 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 LAMTOR2Q9Y2Q5 125 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 TMEM50AO95807 157 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 MBNL2Q5VZF2 373 aaKnown RBP11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 PPIAL4EA0A075B759 164 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 IGHV3-21A0A0B4J1V1 117 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 PPIAL4DF5H284 164 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 DANCRP0C864 163 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 PPIAL4FP0DN26 164 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 PRICKLE4Q2TBC4 344 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 TMEM91Q6ZNR0 172 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms