RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-203ENST00000359759 S4R3C0 116 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 MOSP00540 346 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 MFAP4P55083 255 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 KCNS1Q96KK3 526 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 TMEM70Q9BUB7 260 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 PPP1R3EQ9H7J1 279 aa13.79□□□□□ -0.2
COL18A1-203ENST00000359759 A0A0J9YW62 118 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 ZNF324BQ6AW86 544 aaPredicted RBP13.78□□□□□ -0.2
COL18A1-203ENST00000359759 RRHO14718 337 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 MGST3O14880 152 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 MPV17P39210 176 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 ATP5G2Q06055 141 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 MMD2Q8IY49 270 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 GPR132Q9UNW8 380 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 TCF24Q7RTU0 167 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 SPSB4Q96A44 273 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 DMRT1Q9Y5R6 373 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 C1QAP02745 245 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 TNFRSF9Q07011 255 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 GCSAMQ8N6F7 178 aa13.78□□□□□ -0.2
COL18A1-203ENST00000359759 C8orf88P0DMB2 117 aa13.77□□□□□ -0.2
COL18A1-203ENST00000359759 GLIPR1P48060 266 aa13.77□□□□□ -0.2
COL18A1-203ENST00000359759 RPS20P60866 119 aaKnown RBP13.77□□□□□ -0.2
COL18A1-203ENST00000359759 CENPWQ5EE01 88 aa13.77□□□□□ -0.2
COL18A1-203ENST00000359759 HIST1H2BAQ96A08 127 aa13.77□□□□□ -0.2
COL18A1-203ENST00000359759 PMCHL2Q9BQD1 86 aa13.77□□□□□ -0.2
COL18A1-203ENST00000359759 KCNE5Q9UJ90 142 aa13.77□□□□□ -0.2
COL18A1-203ENST00000359759 DOCK2Q92608 1830 aa13.77□□□□□ -0.2
COL18A1-203ENST00000359759 A0A1B0GWB2 263 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 NDUFA3O95167 84 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 CA1P00915 261 aaPredicted RBP13.77□□□□□ -0.21
COL18A1-203ENST00000359759 DCAF10Q5QP82 559 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 MARVELD3Q96A59 401 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 IMMP2LQ96T52 175 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 IGHV3-49A0A0A0MS15 119 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 ERGP11308 486 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 STPG3Q8N7X2 389 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 ALX4Q9H161 411 aaPredicted RBP13.77□□□□□ -0.21
COL18A1-203ENST00000359759 ASAH2BP0C7U1 165 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 CLEC2AQ6UVW9 174 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 REC114Q7Z4M0 266 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 MIA3Q5JRA6 1907 aa13.77□□□□□ -0.21
COL18A1-203ENST00000359759 CD160O95971 181 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 Q5BKY6 102 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 ZNF818PQ6ZRF7 136 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 KIR2DL4Q99706 377 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 DPRXA6NFQ7 191 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 H2BFSP57053 126 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 LILRA6Q6PI73 481 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 ZNF414Q96IQ9 312 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 PEF1Q9UBV8 284 aaKnown RBP13.76□□□□□ -0.21
COL18A1-203ENST00000359759 IGKV3D-20A0A0C4DH25 116 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 C21orf140B9A014 251 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 ATXN7O15265 892 aaPredicted RBP13.76□□□□□ -0.21
COL18A1-203ENST00000359759 MC5RP33032 325 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 GZMMP51124 257 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 AQP3Q92482 292 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 ZFC3H1O60293 1989 aaKnown RBP13.76□□□□□ -0.21
COL18A1-203ENST00000359759 A0A1B0GV72 72 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 LINC00305Q7Z4B0 112 aa13.76□□□□□ -0.21
COL18A1-203ENST00000359759 OR11H4Q8NGC9 324 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 MARS2Q96GW9 593 aaKnown RBP13.75□□□□□ -0.21
COL18A1-203ENST00000359759 AQP10Q96PS8 301 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 C5orf66Q9H5L9 145 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 TRBV5-3A0A0A0MS03 114 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 SLC17A3O00476 420 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 SELENOTP62341 195 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 MEF2CQ06413 473 aaPredicted RBP13.75□□□□□ -0.21
COL18A1-203ENST00000359759 TMEM183AQ8IXX5 376 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 AKAP11Q9UKA4 1901 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 MRPS18AQ9NVS2 196 aaKnown RBP13.75□□□□□ -0.21
COL18A1-203ENST00000359759 TRAV12-3A0A0B4J271 114 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 APOMO95445 188 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 C10orf128Q5T292 105 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 DLL3Q9NYJ7 618 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 MARCH11A6NNE9 402 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 C17orf51A8MQB3 221 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 FOXS1O43638 330 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 DIRC2Q96SL1 478 aa13.75□□□□□ -0.21
COL18A1-203ENST00000359759 ISXQ2M1V0 245 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 OR51G1Q8NGK1 321 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 ZFP36L2P47974 494 aaKnown RBP13.74□□□□□ -0.21
COL18A1-203ENST00000359759 FAM27BQ5VT28 67 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 NPIPB8E9PQR5 432 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 NPIPB9F8W1W9 429 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 M0R381 172 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 NPIPB7O75200 414 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 IGHV4-39P01824 125 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 HBBP68871 147 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 FAM159AQ6UWV7 190 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 FSTP19883 344 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 RPS11P62280 158 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL18A1-203ENST00000359759 LAMTOR1Q6IAA8 161 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 MTURNQ8N3F0 131 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 JKAMPQ9P055 326 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 ZP4Q12836 540 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 OR5A1Q8NGJ0 315 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 DNASE2BQ8WZ79 361 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms