RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 FAM90A18PA6NE21 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A16PA6NEW6 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A20PA6NIJ5 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 CRYM-AS1A6NIL9 109 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A8PA6NJQ4 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A7PA6NKC0 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A22PA8MWA6 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A12PA8MX19 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A5PA8MXJ8 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A23PA8MXZ1 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 H0YIZ8 118 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 K7ERU9 68 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 TK1P04183 234 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 CLEC3BP05452 202 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 CTSDP07339 412 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A15PP0C7V4 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A13PP0C7W8 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A14PP0C7W9 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 FAM90A24PP0C7X0 464 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 STAG3L2P0CL84 134 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 PSG2P11465 335 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 TAS2R31P59538 309 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 ERVFRD-1P60508 538 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 ADORA2A-AS1P86434 159 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 TNFAIP6P98066 277 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF616Q08AN1 781 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 RBM39Q14498 530 aaKnown RBP4.25□□□□□ -1.73
ATXN3-202ENST00000359366 IL13RA2Q14627 380 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF146Q15072 292 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 COL5A1-AS1Q5SY13 56 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 UNQ6126/PRO20091Q6UXV3 157 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF497Q6ZNH5 498 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF546Q86UE3 836 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 SGPP2Q8IWX5 399 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 OR10V1Q8NGI7 309 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 OR10D4PQ8NGN7 298 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 OR51H1Q8NH63 302 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 WFDC12Q8WWY7 111 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 ARL11Q969Q4 196 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 MOB3AQ96BX8 217 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 SLC5A7Q9GZV3 580 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 PLK3Q9H4B4 646 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 HES4Q9HCC6 221 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 DNAJC4Q9NNZ3 241 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 OR5AC2Q9NZP5 309 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 JKAMPQ9P055 326 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 PPP1R3CQ9UQK1 317 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 MMP24Q9Y5R2 645 aa4.25□□□□□ -1.73
ATXN3-202ENST00000359366 MSGN1A6NI15 193 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 F5H0A9 414 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 OR8U9P0C7N5 309 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 PRDX2P32119 198 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 CA7P43166 264 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 PTTG1IPP53801 180 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 HLA-DRB3P79483 266 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 RAB32Q13637 225 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 TMEM241Q24JQ0 296 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 C5orf64Q2M2E5 130 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 GGNBP1Q5YKI7 109 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 TBC1D26Q86UD7 250 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 SELENOHQ8IZQ5 122 aaKnown RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF808Q8N4W9 903 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 FAM169BQ8N8A8 192 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 OR13A1Q8NGR1 328 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 LEAP2Q969E1 77 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 ANAPC16Q96DE5 110 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 VKORC1Q9BQB6 163 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 ALKBH7Q9BT30 221 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 PRO1933Q9H354 126 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 NAA60Q9H7X0 242 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 GCM1Q9NP62 436 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 KCNS2Q9ULS6 477 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 RBM7Q9Y580 266 aaKnown RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 POMT1Q9Y6A1 747 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 CHD6Q8TD26 2715 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 DSCAML1Q8TD84 2053 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 MALRD1Q5VYJ5 2156 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 IGLV3-9A0A075B6K5 115 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 A0A1W2PPE3 182 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 C12orf77C9JDV5 145 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 E7EQL1 145 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 LYNX1G3V0Z9 82 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 DFFBO76075 338 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 LY6HO94772 140 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 GYPAP02724 150 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 SNRPCP09234 159 aaKnown RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 LYNX1P0DP58 116 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 PPP1CCP36873 323 aaKnown RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 CAMLGP49069 296 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 EDDM3BP56851 147 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 TMEM33P57088 247 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 KIAA0141Q14154 515 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 TMEM187Q14656 261 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 TESK1Q15569 626 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 IAH1Q2TAA2 248 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-202ENST00000359366 SMIM21Q3B7S5 101 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 NCR3LG1Q68D85 454 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 C11orf87Q6NUJ2 197 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 Q8IYB0 196 aa4.24□□□□□ -1.73
ATXN3-202ENST00000359366 FAM216BQ8N7L0 139 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms