RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 A6NDX4 124 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 MPPED1O15442 326 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 PEX14O75381 377 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 AKR1C4P17516 323 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 F2RP25116 425 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 DCTN2Q13561 401 aaKnown RBP12.2□□□□□ -0.46
TPM1-206ENST00000358278 EBI3Q14213 229 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 FBLN7Q53RD9 439 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 DHRS7BQ6IAN0 325 aaPredicted RBP12.2□□□□□ -0.46
TPM1-206ENST00000358278 LIAT1Q6ZQX7 453 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 SPAG16Q8N0X2 631 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 OR4C13Q8NGP0 309 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 SLC25A33Q9BSK2 321 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 CLDN34H7C241 214 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 CCBE1Q6UXH8 406 aaPredicted RBP12.2□□□□□ -0.46
TPM1-206ENST00000358278 CENPSQ8N2Z9 138 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 ADAD2Q8NCV1 583 aaKnown RBP12.2□□□□□ -0.46
TPM1-206ENST00000358278 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 HARBI1Q96MB7 349 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 C20orf85Q9H1P6 137 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 RAB18Q9NP72 206 aa12.2□□□□□ -0.46
TPM1-206ENST00000358278 TNCP24821 2201 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 NCBP2LA6PVI3 153 aaKnown RBP12.19□□□□□ -0.46
TPM1-206ENST00000358278 SHOXO15266 292 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 RAMP3O60896 148 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 OR2F2O95006 317 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 TCRBP04435 133 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 RPS16P62249 146 aaKnown RBP12.19□□□□□ -0.46
TPM1-206ENST00000358278 UBA52P62987 128 aaKnown RBP12.19□□□□□ -0.46
TPM1-206ENST00000358278 MMDQ15546 238 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 C16orf82Q7Z2V1 217 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 SGPP2Q8IWX5 399 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 TCTEX1D1Q8N7M0 179 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 RBM14Q96PK6 669 aaKnown RBP12.19□□□□□ -0.46
TPM1-206ENST00000358278 NUDT15Q9NV35 164 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 FLVCR2Q9UPI3 526 aa12.19□□□□□ -0.46
TPM1-206ENST00000358278 TRAV6A0A075B6T7 132 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 C3orf85A0A1B0GTC6 90 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 ARPC1BO15143 372 aaKnown RBP12.18□□□□□ -0.46
TPM1-206ENST00000358278 CHST1O43916 411 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 TAS2R31P59538 309 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 C11orf88Q6PI97 169 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 NRARPQ7Z6K4 114 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 Q8N6K4 173 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 OSR1Q8TAX0 266 aaPredicted RBP12.18□□□□□ -0.46
TPM1-206ENST00000358278 NAA60Q9H7X0 242 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 C1RLQ9NZP8 487 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 MOB4Q9Y3A3 225 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 ATRQ13535 2644 aa12.18□□□□□ -0.46
TPM1-206ENST00000358278 H0Y980 276 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 TRIM77I1YAP6 450 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 RBFOX2O43251 390 aaKnown RBP eCLIP12.17□□□□□ -0.46
TPM1-206ENST00000358278 GPR137BO60478 399 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 RNASE1P07998 156 aaKnown RBP12.17□□□□□ -0.46
TPM1-206ENST00000358278 BRWD1-AS2P59051 145 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 TMEM177Q53S58 311 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 OR8H1Q8NGG4 311 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 RITA1Q96K30 269 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 TP53RKQ96S44 253 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 TSNAXQ99598 290 aaKnown RBP12.17□□□□□ -0.46
TPM1-206ENST00000358278 RNF5Q99942 180 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 KIAA1456Q9P272 454 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 NBR2O15453 112 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 SERPINE2P07093 398 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 OR5AC1P0C628 307 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 CNTFRP26992 372 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 F2RL1P55085 397 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 KCNIP3Q9Y2W7 256 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 NUBP2Q9Y5Y2 271 aa12.17□□□□□ -0.46
TPM1-206ENST00000358278 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 M0QZK8 103 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 S1PR2O95136 353 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 HPRT1P00492 218 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 CRYBA1P05813 215 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 VAMP1P23763 118 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 LGALS7P47929 136 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 SRSF2Q01130 221 aaKnown RBP12.16□□□□□ -0.46
TPM1-206ENST00000358278 PLGLAQ15195 96 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 TRIM16LQ309B1 348 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 SP6Q3SY56 376 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 PLEKHA2Q9HB19 425 aa12.16□□□□□ -0.46
TPM1-206ENST00000358278 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
TPM1-206ENST00000358278 FGF16O43320 207 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 SLC25A17O43808 307 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 SPDEFO95238 335 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 PTTG1O95997 202 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 HRASP01112 189 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 H2AFB2P0C5Z0 115 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 ANXA3P12429 323 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
TPM1-206ENST00000358278 LPAR6P43657 344 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
TPM1-206ENST00000358278 VMA21Q3ZAQ7 101 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 PLET1Q6UQ28 207 aa12.15□□□□□ -0.46
TPM1-206ENST00000358278 COMMD9Q9P000 198 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms