RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 RND3P61587 244 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 SRSF2Q01130 221 aaKnown RBP11.89□□□□□ -0.51
CCNE1-202ENST00000357943 CADM3Q8N126 398 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 ADAD2Q8NCV1 583 aaKnown RBP11.89□□□□□ -0.51
CCNE1-202ENST00000357943 SCGB3A2Q96PL1 93 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 VPREB3Q9UKI3 123 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 C14orf166Q9Y224 244 aaKnown RBP11.89□□□□□ -0.51
CCNE1-202ENST00000357943 PRELID3BQ9Y3B1 194 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 NUBP2Q9Y5Y2 271 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 MPPED1O15442 326 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 RAMP3O60896 148 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 MOSP00540 346 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 TMEM11P17152 192 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 F2RP25116 425 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 S100GP29377 79 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 CATR1Q13166 79 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 TMED4Q7Z7H5 227 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 PDPNQ86YL7 162 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 SPAG16Q8N0X2 631 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 TMEM86BQ8N661 226 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 TMEM230Q96A57 120 aa11.89□□□□□ -0.51
CCNE1-202ENST00000357943 JMJD1CQ15652 2540 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 INMT-MINDY4F8WBC2 141 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 CLDN34H7C241 214 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 PEX14O75381 377 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 CRYZL1O95825 349 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 F2RL1P55085 397 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 TAGLNQ01995 201 aaKnown RBP11.88□□□□□ -0.51
CCNE1-202ENST00000357943 RTL8BQ17RB0 113 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 Q8N6K4 173 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 PITPNC1Q9UKF7 332 aa11.88□□□□□ -0.51
CCNE1-202ENST00000357943 RNF212BA8MTL3 300 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 CHST1O43916 411 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 AKR1C4P17516 323 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 CNTFRP26992 372 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 UBA52P62987 128 aaKnown RBP11.87□□□□□ -0.51
CCNE1-202ENST00000357943 CCDC71LQ8N9Z2 235 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 FLYWCH2Q96CP2 140 aaKnown RBP11.87□□□□□ -0.51
CCNE1-202ENST00000357943 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
CCNE1-202ENST00000357943 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 C20orf85Q9H1P6 137 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 LIN7CQ9NUP9 197 aaKnown RBP11.87□□□□□ -0.51
CCNE1-202ENST00000357943 NUDT15Q9NV35 164 aa11.87□□□□□ -0.51
CCNE1-202ENST00000357943 A0A0A6YYJ9 748 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 A0A0B4J293 547 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 CRYM-AS1A6NIL9 109 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 ARPC1BO15143 372 aaKnown RBP11.86□□□□□ -0.51
CCNE1-202ENST00000357943 IFNA2P01563 188 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 VSIG10L2P0DP72 767 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 RRASP10301 218 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 SP6Q3SY56 376 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 TP53RKQ96S44 253 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 PLSCR3Q9NRY6 295 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 TRAV6A0A075B6T7 132 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 TEX13DA0A0J9YY54 714 aaPredicted RBP11.86□□□□□ -0.51
CCNE1-202ENST00000357943 C3orf85A0A1B0GTC6 90 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 NCBP2LA6PVI3 153 aaKnown RBP11.86□□□□□ -0.51
CCNE1-202ENST00000357943 SRRM4A7MD48 611 aaKnown RBP11.86□□□□□ -0.51
CCNE1-202ENST00000357943 GPR137BO60478 399 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 OR2F2O95006 317 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
CCNE1-202ENST00000357943 H2AFB2P0C5Z0 115 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 RAG2P55895 527 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
CCNE1-202ENST00000357943 SUPT4H1P63272 117 aaKnown RBP11.86□□□□□ -0.51
CCNE1-202ENST00000357943 MMDQ15546 238 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 ZNF585BQ52M93 769 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 TMEM177Q53S58 311 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 DHRS7BQ6IAN0 325 aaPredicted RBP11.86□□□□□ -0.51
CCNE1-202ENST00000357943 OR4S2Q8NH73 311 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 HARBI1Q96MB7 349 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 NAA60Q9H7X0 242 aa11.86□□□□□ -0.51
CCNE1-202ENST00000357943 FAM181BA6NEQ2 426 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 SHOXO15266 292 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 ATP6V1G1O75348 118 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 OR5AC1P0C628 307 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 ANXA7P20073 488 aaKnown RBP11.85□□□□□ -0.51
CCNE1-202ENST00000357943 KIR2DS2P43631 304 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 RAB25P57735 213 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 TATDN3Q17R31 274 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 LIAT1Q6ZQX7 453 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 SLC25A42Q86VD7 318 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 PRIMA1Q86XR5 153 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 CHAC2Q8WUX2 184 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCNE1-202ENST00000357943 NEURL2Q9BR09 285 aa11.85□□□□□ -0.51
CCNE1-202ENST00000357943 H0Y980 276 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 RBFOX2O43251 390 aaKnown RBP eCLIP11.84□□□□□ -0.51
CCNE1-202ENST00000357943 S1PR2O95136 353 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 DHFRP00374 187 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 AMY1AP04745 511 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 TMEM128Q5BJH2 165 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 SGPP2Q8IWX5 399 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 VKORC1L1Q8N0U8 176 aa11.84□□□□□ -0.51
CCNE1-202ENST00000357943 Q8N9W7 124 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms