RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 UTF1Q5T230 341 aa13.14□□□□□ -0.31
PHTF1-201ENST00000357783 DUX4L9Q6RFH8 374 aaPredicted RBP13.14□□□□□ -0.31
PHTF1-201ENST00000357783 NIPSNAP3BQ9BS92 247 aa13.14□□□□□ -0.31
PHTF1-201ENST00000357783 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
PHTF1-201ENST00000357783 MAP1LC3BQ9GZQ8 125 aa13.14□□□□□ -0.31
PHTF1-201ENST00000357783 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 IGKV1D-33P01593 117 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 IGKV1-33P01594 117 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 FGF7P21781 194 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 LOXL3P58215 753 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 RNF212Q495C1 297 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 OR10P1Q8NGE3 313 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 PINX1Q96BK5 328 aaKnown RBP13.13□□□□□ -0.31
PHTF1-201ENST00000357783 ZNF251Q9BRH9 671 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 GSN-AS1Q9NRJ2 163 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 CALYQ9NYX4 217 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 RAI1Q7Z5J4 1906 aaPredicted RBP13.13□□□□□ -0.31
PHTF1-201ENST00000357783 DSCAML1Q8TD84 2053 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 YPEL1O60688 119 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 S100A8P05109 93 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 SNRPEP62304 92 aaKnown RBP13.13□□□□□ -0.31
PHTF1-201ENST00000357783 C3orf36Q3SXR2 165 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 VKORC1L1Q8N0U8 176 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 DEFB108BQ8NET1 73 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
PHTF1-201ENST00000357783 YPEL2Q96QA6 119 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 CISD1Q9NZ45 108 aaKnown RBP13.13□□□□□ -0.31
PHTF1-201ENST00000357783 PIEZO2Q9H5I5 2752 aa13.13□□□□□ -0.31
PHTF1-201ENST00000357783 A8MXE2 369 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 HMGB3O15347 200 aaKnown RBP13.12□□□□□ -0.31
PHTF1-201ENST00000357783 SLC31A2O15432 143 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 APC2O95996 2303 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 TNFAIP6P98066 277 aaPredicted RBP13.12□□□□□ -0.31
PHTF1-201ENST00000357783 TFF3Q07654 80 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 ADAM5Q6NVV9 412 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 RPP25LQ8N5L8 163 aaKnown RBP13.12□□□□□ -0.31
PHTF1-201ENST00000357783 TVP23CQ96ET8 276 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 PCNX1Q96RV3 2341 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 IFI27L2Q9H2X8 130 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 TANC2Q9HCD6 1990 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 PTPRZ1P23471 2315 aaPredicted RBP13.12□□□□□ -0.31
PHTF1-201ENST00000357783 A0A1W2PPE3 182 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 F2RL2O00254 374 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 CYB5R3P00387 301 aaPredicted RBP13.12□□□□□ -0.31
PHTF1-201ENST00000357783 IFNA17P01571 189 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 SELENOVP59797 346 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 ATP6V1FQ16864 119 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 CR1LQ2VPA4 569 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 PRAMEF5Q5TYX0 476 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 Q8TCH9 128 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 GCM1Q9NP62 436 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 TIMM9Q9Y5J7 89 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 TRAV20A0A0B4J274 112 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 IGHV1-46P01743 117 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 CD40P25942 277 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 KRTCAP3Q53RY4 240 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 ZNF561Q8N587 486 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 LHX4Q969G2 390 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 SLC39A9Q9NUM3 307 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 OR6C3Q9NZP0 311 aa13.12□□□□□ -0.31
PHTF1-201ENST00000357783 BSNQ9UPA5 3926 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 DMXL2Q8TDJ6 3036 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 AGAP20933 346 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 CCKARP32238 428 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 FAM90A2PQ658T7 463 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 RBMS3Q6XE24 437 aaKnown RBP13.11□□□□□ -0.31
PHTF1-201ENST00000357783 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
PHTF1-201ENST00000357783 RNF7Q9UBF6 113 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 ROS1P08922 2347 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 C5orf52A6NGY3 159 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 HPRT1P00492 218 aa13.11□□□□□ -0.31
PHTF1-201ENST00000357783 TET2Q6N021 2002 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-201ENST00000357783 DYSFO75923 2080 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 MKRN2OSH3BPM6 223 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 UBE2CO00762 179 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 GATA4P43694 442 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 TLE1Q04724 770 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 C17orf58Q2M2W7 97 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 C1orf229Q6ZS94 237 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-201ENST00000357783 TGIF2LYQ8IUE0 185 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 OR10G4Q8NGN3 311 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 CA5BP1Q8WTZ4 195 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 YPEL4Q96NS1 127 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 SH3BGRL2Q9UJC5 107 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 YLPM1P49750 1951 aaKnown RBP13.1□□□□□ -0.31
PHTF1-201ENST00000357783 C15orf62A8K5M9 175 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 S100A9P06702 114 aaKnown RBP13.1□□□□□ -0.31
PHTF1-201ENST00000357783 S100A6P06703 90 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 ZNF343Q6P1L6 599 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 SLC35E3Q7Z769 313 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 CENPVQ7Z7K6 275 aaPredicted RBP13.1□□□□□ -0.31
PHTF1-201ENST00000357783 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 ABHD17AQ96GS6 310 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 NPCDR1Q9BY65 106 aa13.1□□□□□ -0.31
PHTF1-201ENST00000357783 ERVK-16P61578 105 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 MRGPRGQ86SM5 289 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms