RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ZDHHC16Q969W1 377 aa14.8□□□□□ -0.04
RTN4-204ENST00000357732 GMPPAQ96IJ6 420 aaPredicted RBP14.8□□□□□ -0.04
RTN4-204ENST00000357732 MED12LQ86YW9 2145 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 TRAV9-1A0A075B6T8 112 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 A0A1W2PNU3 283 aaPredicted RBP14.79□□□□□ -0.04
RTN4-204ENST00000357732 MARCH11A6NNE9 402 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 C15orf62A8K5M9 175 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 HTD2P86397 168 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 PMP22Q01453 160 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 PDLIM3Q53GG5 364 aaPredicted RBP14.79□□□□□ -0.04
RTN4-204ENST00000357732 INO80CQ6PI98 192 aaPredicted RBP14.79□□□□□ -0.04
RTN4-204ENST00000357732 OR52E5Q8NH55 327 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 TMEM37Q8WXS4 190 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 WDYHV1Q96HA8 205 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 KIAA2026Q5HYC2 2103 aa14.79□□□□□ -0.04
RTN4-204ENST00000357732 RBMXL2O75526 392 aaKnown RBP14.78□□□□□ -0.04
RTN4-204ENST00000357732 GRPP07492 148 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 NPPCP23582 126 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 IL3RAP26951 378 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 OPRK1P41145 380 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 TMPRSS3P57727 454 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 PSG7Q13046 419 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 UNQ6494/PRO21346Q6UXR6 183 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 A0A1W2PPV4 95 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 TMEM164Q5U3C3 297 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 ACP7Q6ZNF0 438 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 COQ2Q96H96 371 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 CXXC4Q9H2H0 198 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 PXMP4Q9Y6I8 212 aa14.78□□□□□ -0.04
RTN4-204ENST00000357732 SPCS3P61009 180 aa14.77□□□□□ -0.04
RTN4-204ENST00000357732 GNB1P62873 340 aa14.77□□□□□ -0.04
RTN4-204ENST00000357732 HNF4GQ14541 408 aa14.77□□□□□ -0.04
RTN4-204ENST00000357732 MRPL41Q8IXM3 137 aaKnown RBP14.77□□□□□ -0.04
RTN4-204ENST00000357732 TMEM204Q9BSN7 226 aa14.77□□□□□ -0.04
RTN4-204ENST00000357732 ZNF705GA8MUZ8 300 aaPredicted RBP14.77□□□□□ -0.05
RTN4-204ENST00000357732 ST8SIA5O15466 376 aa14.77□□□□□ -0.05
RTN4-204ENST00000357732 FOSL1P15407 271 aa14.77□□□□□ -0.05
RTN4-204ENST00000357732 GABRA2P47869 451 aa14.77□□□□□ -0.05
RTN4-204ENST00000357732 AESQ08117 197 aa14.77□□□□□ -0.05
RTN4-204ENST00000357732 FAM78BQ5VT40 261 aa14.77□□□□□ -0.05
RTN4-204ENST00000357732 VASH2Q86V25 355 aa14.77□□□□□ -0.05
RTN4-204ENST00000357732 RBFOX2O43251 390 aaKnown RBP eCLIP14.76□□□□□ -0.052e-9■■■■□ 21
RTN4-204ENST00000357732 SPINT2O43291 252 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 HPRT1P00492 218 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 CD46P15529 392 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 SSX2Q16385 188 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 R3HDM4Q96D70 268 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 OBP2BQ9NPH6 170 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 TRAPPC1Q9Y5R8 145 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 SMIM21Q3B7S5 101 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 MYPOPQ86VE0 399 aaPredicted RBP14.76□□□□□ -0.05
RTN4-204ENST00000357732 C11orf53Q8IXP5 236 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 KLF14Q8TD94 323 aaPredicted RBP14.76□□□□□ -0.05
RTN4-204ENST00000357732 SFRP2Q96HF1 295 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 FER1L6-AS2Q96M78 137 aa14.76□□□□□ -0.05
RTN4-204ENST00000357732 TRGV5A0A0B4J1U4 118 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 LINC00473A8K010 186 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 CXorf1O96002 111 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 CELA3BP08861 270 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 STAG3L2P0CL84 134 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 STAG3L3P0CL85 134 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 CEBPDP49716 269 aaPredicted RBP14.75□□□□□ -0.05
RTN4-204ENST00000357732 YPEL3P61236 119 aaPredicted RBP14.75□□□□□ -0.05
RTN4-204ENST00000357732 MRGPRDQ8TDS7 321 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 A0A0U1RQK1 487 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 MDFIC2A0A1B0GVS7 189 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 ZNF320A2RRD8 509 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 CD82P27701 267 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 CHRNA7P36544 502 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 BTNL3Q6UXE8 466 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 MISP3Q96FF7 219 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 ARRDC1-AS1Q9H2J1 176 aa14.75□□□□□ -0.05
RTN4-204ENST00000357732 NDUFB4O95168 129 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 SOX8P57073 446 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 ALKBH6Q3KRA9 238 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 CST9LP1Q5W188 147 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 GUCD1Q96NT3 240 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 QTRT1Q9BXR0 403 aaKnown RBP14.74□□□□□ -0.05
RTN4-204ENST00000357732 IGHV1-2P23083 117 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 MZT1Q08AG7 82 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 MRPL52Q86TS9 123 aaKnown RBP14.74□□□□□ -0.05
RTN4-204ENST00000357732 ELOVL5Q9NYP7 299 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
RTN4-204ENST00000357732 LY96Q9Y6Y9 160 aa14.74□□□□□ -0.05
RTN4-204ENST00000357732 RNF224P0DH78 156 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 KITLGP21583 273 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 DUTP33316 252 aaKnown RBP14.73□□□□□ -0.05
RTN4-204ENST00000357732 ATP5G3P48201 142 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 TLE1Q04724 770 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 TRIP6Q15654 476 aaKnown RBP14.73□□□□□ -0.05
RTN4-204ENST00000357732 WDR82Q6UXN9 313 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 C1orf174Q8IYL3 243 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 FKBP11Q9NYL4 201 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 IL17BQ9UHF5 180 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 JPT1Q9UK76 154 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 GALR2O43603 387 aaPredicted RBP14.73□□□□□ -0.05
RTN4-204ENST00000357732 NDUFB7P17568 137 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 KIR2DS2P43631 304 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 FOXF2Q12947 444 aa14.73□□□□□ -0.05
RTN4-204ENST00000357732 CLEC12BQ2HXU8 276 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms