RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PINX1Q96BK5 328 aaKnown RBP6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 STARD4Q96DR4 205 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 PRRG4Q9BZD6 226 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 FGF23Q9GZV9 251 aaPredicted RBP6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 IL36GQ9NZH8 169 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 TRAPPC2LQ9UL33 140 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR2W1Q9Y3N9 320 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 CLDN18P56856 261 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 Q6ZSR3 168 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 SAXO1Q8IYX7 474 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF808Q8N4W9 903 aaPredicted RBP6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR10V1Q8NGI7 309 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 SAMD10Q9BYL1 202 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 RYDENQ9NUL5 291 aaKnown RBP6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 ASPMQ8IZT6 3477 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 DIRC3C9JPN6 131 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 RHBDL1O75783 438 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 SRP14P37108 136 aaKnown RBP6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 MPLP40238 635 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 KRTDAPP60985 99 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 MEF2BQ02080 365 aaPredicted RBP6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 SLC38A11Q08AI6 406 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 MRGPRGQ86SM5 289 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 C1orf174Q8IYL3 243 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF525Q8N782 197 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 KLHDC1Q8N7A1 406 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 HIPK2Q9H2X6 1198 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF391Q9UJN7 358 aa6.97□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR5B21A6NL26 309 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 GALR2O43603 387 aaPredicted RBP6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 CA6P23280 308 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 EPHA8P29322 1005 aaPredicted RBP6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 PSMB3P49720 205 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 RPL23P62829 140 aaKnown RBP6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 LCN2P80188 198 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 RHOGP84095 191 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 MSMO1Q15800 293 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 PCSK4Q6UW60 755 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 CENPVQ7Z7K6 275 aaPredicted RBP6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 GGNQ86UU5 652 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF295-AS1Q8N0V1 137 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 RPP25LQ8N5L8 163 aaKnown RBP6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 MRPL30Q8TCC3 161 aaKnown RBP6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 ANAPC16Q96DE5 110 aa6.96□□□□□ -1.29
CDC42SE1-201ENST00000357235 GRIFINA4D1Z8 144 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM166BA8MTA8 275 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 DEGS1O15121 323 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGKV1D-33P01593 117 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGKV1-33P01594 117 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGKV1-39P01597 117 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGKV1D-39P04432 117 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 CTRLP40313 264 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 CEACAM21Q3KPI0 293 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 SPINK14Q6IE38 97 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR4A47Q6IF82 309 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 HAPLN4Q86UW8 402 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 NIT1Q86X76 327 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 TUSC5Q8IXB3 177 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 IMMP1LQ96LU5 166 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 PARLQ9H300 379 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 MRPS17Q9Y2R5 130 aaKnown RBP6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 DOCK10Q96BY6 2186 aa6.96□□□□□ -1.3
CDC42SE1-201ENST00000357235 KLF7O75840 302 aaPredicted RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 KBTBD11O94819 623 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGKV1-5P01602 117 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 CRYAAP02489 173 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 IL3RAP26951 378 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 ARR3P36575 388 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 GABRA2P47869 451 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 TRIM61Q5EBN2 209 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 ERASQ7Z444 233 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 WFDC8Q8IUA0 241 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM58AQ8N1B3 248 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 WFDC12Q8WWY7 111 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 TAF15Q92804 592 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 WDYHV1Q96HA8 205 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 ABHD14BQ96IU4 210 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 DUSP23Q9BVJ7 150 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 WDR61Q9GZS3 305 aaKnown RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 MRPS16Q9Y3D3 137 aaKnown RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 USF3Q68DE3 2245 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 TRAV24A0A0B4J272 114 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 DUXBA0A1W2PPF3 345 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZNF503-AS2A6NEH8 195 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 ANKRD30BLA7E2S9 258 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 CORTO00230 105 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 PAGE4O60829 102 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 TOX4O94842 621 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 TSPOP30536 169 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 SRD5A2P31213 254 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 G6PCP35575 357 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 FOLR3P41439 243 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 COMPP49747 757 aaPredicted RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 RPL15P61313 204 aaKnown RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 C3AR1Q16581 482 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM53AQ6NSI3 398 aaPredicted RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR2M7Q8NG81 312 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 AGMATQ9BSE5 352 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms