RNA–Protein interactions for RNA: ENST00000356462.10

NEDD4L-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-202ENST00000356462 C1orf229Q6ZS94 237 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-202ENST00000356462 ZNF709Q8N972 641 aa12.74□□□□□ -0.37
NEDD4L-202ENST00000356462 OR10P1Q8NGE3 313 aa12.74□□□□□ -0.37
NEDD4L-202ENST00000356462 LINC01560Q8TB33 94 aa12.74□□□□□ -0.37
NEDD4L-202ENST00000356462 RAB39BQ96DA2 213 aa12.74□□□□□ -0.37
NEDD4L-202ENST00000356462 LRFN3Q9BTN0 628 aa12.74□□□□□ -0.37
NEDD4L-202ENST00000356462 CARHSP1Q9Y2V2 147 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-202ENST00000356462 STRAPQ9Y3F4 350 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-202ENST00000356462 ACTL6BO94805 426 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 ZNF525Q8N782 197 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 GNPNAT1Q96EK6 184 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 PROP1O75360 226 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 CD40P25942 277 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 HOXA1P49639 335 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 ADIRFQ15847 76 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 FFAR4Q5NUL3 377 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 DYNLRB1Q9NP97 96 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 DYSFO75923 2080 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 CELSR1Q9NYQ6 3014 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 DFFBO76075 338 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 IGKV1D-33P01593 117 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 IGKV1-33P01594 117 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 DLK1P80370 383 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 ZNF880Q6PDB4 577 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 Q6ZS92 163 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 RCC1LQ96I51 464 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 S1PR3Q99500 378 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
NEDD4L-202ENST00000356462 LRRC30A6NM36 301 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 HSPB1P04792 205 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 LHFPL4Q7Z7J7 247 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 GCM1Q9NP62 436 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 CALYQ9NYX4 217 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 A0A1W2PRD5 423 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 A0A1W2PRF3 423 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 A0A1W2PRM7 423 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 RNF212BA8MTL3 300 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 SLC35E4Q6ICL7 350 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 RBMS3Q6XE24 437 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 Q6ZS49 121 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 C1orf196B1AJZ1 125 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 IGHV1-46P01743 117 aa12.72□□□□□ -0.37
NEDD4L-202ENST00000356462 A8MXE2 369 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 SCAF4O95104 1147 aaKnown RBP12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 GRNP28799 593 aaKnown RBP12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 RAB13P51153 203 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 ZNF726P1Q15940 193 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 TIMM23BQ5SRD1 257 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 SLC16A13Q7RTY0 426 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 MOB3BQ86TA1 216 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 SPACA3Q8IXA5 215 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 OR4F5Q8NH21 305 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 HIST1H2BAQ96A08 127 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 OR4F4Q96R69 305 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 NIPSNAP3BQ9BS92 247 aa12.71□□□□□ -0.37
NEDD4L-202ENST00000356462 MBD3L4A6NDZ8 208 aaPredicted RBP12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 MBD3L3A6NE82 208 aaPredicted RBP12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 MBD3L5A6NJ08 208 aaPredicted RBP12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 CRYABP02511 175 aaKnown RBP12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 GATA2P23769 480 aaPredicted RBP12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 ERVK-16P61578 105 aa12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 GUSBP1Q15486 140 aa12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 MORN2Q502X0 79 aa12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 WDR25Q64LD2 544 aaPredicted RBP12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 ACSM6Q6P461 480 aa12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 MBD3L2Q8NHZ7 208 aaPredicted RBP12.71□□□□□ -0.38
NEDD4L-202ENST00000356462 TAF15Q92804 592 aaKnown RBP eCLIP12.71□□□□□ -0.382e-6■■□□□ 13.5
NEDD4L-202ENST00000356462 IGHV3-21A0A0B4J1V1 117 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 C16orf97H3BN30 126 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 RRHO14718 337 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 RTP5Q14D33 572 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 PPP1R35Q8TAP8 253 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 RHOVQ96L33 236 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 COLCA2A8K830 154 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 SRRM5B3KS81 715 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 PRSS44E7EML9 344 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 ENSAO43768 121 aaKnown RBP12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 ZNF737O75373 536 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 GLRXP35754 106 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 ICAM4Q14773 271 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 MLANAQ16655 118 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 RPP25LQ8N5L8 163 aaKnown RBP12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 RNF7Q9UBF6 113 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 PTPRBP23467 1997 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 USP9YO00507 2555 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 CRYBG3Q68DQ2 2970 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 TGIF2-C20orf24A0A0A6YYL0 155 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 PGPEP1LA6NFU8 196 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 KITLGP21583 273 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 CCKARP32238 428 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 OR51G1Q8NGK1 321 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 OR10G4Q8NGN3 311 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 OR10G9Q8NGN4 311 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 OR10G7Q8NGN6 311 aa12.7□□□□□ -0.38
NEDD4L-202ENST00000356462 C11orf1Q9H5F2 150 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms