RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 LINC00205P59089 165 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 ZNF497Q6ZNH5 498 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 TEX43Q6ZNM6 134 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 YPEL2Q96QA6 119 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 C20orf144Q9BQM9 153 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 MRPL18Q9H0U6 180 aaKnown RBP12.79□□□□□ -0.36
VAT1-201ENST00000355653 WDR54Q9H977 334 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 SCO2A0A1W2PP80 73 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 KLF7O75840 302 aaPredicted RBP12.79□□□□□ -0.36
VAT1-201ENST00000355653 GAGE1Q13065 139 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 TUSC5Q8IXB3 177 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 OR5AU1Q8NGC0 362 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 KCNIP2Q9NS61 270 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 MRPS17Q9Y2R5 130 aaKnown RBP12.79□□□□□ -0.36
VAT1-201ENST00000355653 MRPS18CQ9Y3D5 142 aaKnown RBP12.79□□□□□ -0.36
VAT1-201ENST00000355653 CACNA1EQ15878 2313 aa12.79□□□□□ -0.36
VAT1-201ENST00000355653 C17orf98A8MV24 154 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 RAC2P15153 192 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 CEBPDP49716 269 aaPredicted RBP12.78□□□□□ -0.36
VAT1-201ENST00000355653 MOB1BQ7L9L4 216 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 VASH2Q86V25 355 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 OR10G8Q8NGN5 311 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 OPN3Q9H1Y3 402 aaPredicted RBP12.78□□□□□ -0.36
VAT1-201ENST00000355653 PPIAL4AQ9Y536 164 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 FRMD6-AS1P0C7T7 363 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 ARL14EPLP0DKL9 152 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 KRTDAPP60985 99 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 PAFAH1B2P68402 229 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 H2BFWTQ7Z2G1 175 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 DEPPQ9NTK1 212 aa12.78□□□□□ -0.36
VAT1-201ENST00000355653 OR5B21A6NL26 309 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 TIMP3P35625 211 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 LHX2P50458 406 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 YPEL3P61236 119 aaPredicted RBP12.77□□□□□ -0.36
VAT1-201ENST00000355653 MRPS11P82912 194 aaKnown RBP12.77□□□□□ -0.36
VAT1-201ENST00000355653 TGFBR3Q03167 851 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 HLA-DRB5Q30154 266 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 ZNF645Q8N7E2 425 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 OR52L2PQ8NGH6 319 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 C5orf30Q96GV9 206 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.36
VAT1-201ENST00000355653 TNRC6BQ9UPQ9 1833 aaKnown RBP12.77□□□□□ -0.36
VAT1-201ENST00000355653 TNRC6AQ8NDV7 1962 aaKnown RBP12.77□□□□□ -0.37
VAT1-201ENST00000355653 GTF3C1Q12789 2109 aa12.77□□□□□ -0.37
VAT1-201ENST00000355653 FCN1O00602 326 aa12.77□□□□□ -0.37
VAT1-201ENST00000355653 TCF21O43680 179 aa12.77□□□□□ -0.37
VAT1-201ENST00000355653 IER3P46695 156 aa12.77□□□□□ -0.37
VAT1-201ENST00000355653 PINLYPA6NC86 204 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 SIAH2O43255 324 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 SPINK4O60575 86 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 LINC00614P0C842 121 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 CCL4P13236 92 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 EPHA8P29322 1005 aaPredicted RBP12.76□□□□□ -0.37
VAT1-201ENST00000355653 PLP2Q04941 152 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 NXPH2O95156 264 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 IL6RP08887 468 aaPredicted RBP12.76□□□□□ -0.37
VAT1-201ENST00000355653 CD1BP29016 333 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
VAT1-201ENST00000355653 POM121L2Q96KW2 1035 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 MPC1Q9Y5U8 109 aa12.76□□□□□ -0.37
VAT1-201ENST00000355653 J3QT63 122 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 CDIPTO14735 213 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 COL8A2P25067 703 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 OTX2P32243 289 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 C11orf42Q8N5U0 333 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 CIB3Q96Q77 187 aaPredicted RBP12.75□□□□□ -0.37
VAT1-201ENST00000355653 QTRT1Q9BXR0 403 aaKnown RBP12.75□□□□□ -0.37
VAT1-201ENST00000355653 PI4KAP42356 2102 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 RAB7AP51149 207 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 SELENOTP62341 195 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 HOXA4Q00056 320 aaPredicted RBP12.75□□□□□ -0.37
VAT1-201ENST00000355653 CATR1Q13166 79 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 KRTCAP3Q53RY4 240 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 SIGLECL1Q8N7X8 197 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 KCNIP1Q9NZI2 227 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 COL6A3P12111 3177 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 SNURFLB1AK76 121 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 MMDQ15546 238 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 VWC2Q2TAL6 325 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 NRN1LQ496H8 165 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 COL5A1-AS1Q5SY13 56 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 Q8N7P7 452 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 OR2Y1Q8NGV0 311 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 GALMQ96C23 342 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 FBXL7Q9UJT9 491 aa12.75□□□□□ -0.37
VAT1-201ENST00000355653 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
VAT1-201ENST00000355653 K7ESF4 209 aa12.74□□□□□ -0.37
VAT1-201ENST00000355653 IGHEP01854 428 aa12.74□□□□□ -0.37
VAT1-201ENST00000355653 P0C879 139 aa12.74□□□□□ -0.37
VAT1-201ENST00000355653 FOLR3P41439 243 aa12.74□□□□□ -0.37
VAT1-201ENST00000355653 TRA2AQ13595 282 aaKnown RBP eCLIP12.74□□□□□ -0.37
VAT1-201ENST00000355653 MRPL52Q86TS9 123 aaKnown RBP12.74□□□□□ -0.37
VAT1-201ENST00000355653 SCCPDHQ8NBX0 429 aa12.74□□□□□ -0.37
VAT1-201ENST00000355653 NINJ1Q92982 152 aa12.74□□□□□ -0.37
VAT1-201ENST00000355653 LRFN3Q9BTN0 628 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms