RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CXorf1O96002 111 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 HBZP02008 142 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 CD1BP29016 333 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 OPRK1P41145 380 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 AMTP48728 403 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 FAM27E3Q08E93 113 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 AARDQ4LEZ3 155 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 SSX7Q7RTT5 188 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 SAXO1Q8IYX7 474 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF645Q8N7E2 425 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 FADS6Q8N9I5 356 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 C1orf162Q8NEQ5 155 aaPredicted RBP10.48□□□□□ -0.73
COLCA1-201ENST00000355430 NOL4LQ96MY1 436 aaPredicted RBP10.48□□□□□ -0.73
COLCA1-201ENST00000355430 CHRDL1Q9BU40 450 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 IGHV1-69-2A0A0G2JMI3 117 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 B2MP61769 119 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 SGMS2Q8NHU3 365 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 HELZP42694 1942 aaKnown RBP10.48□□□□□ -0.73
COLCA1-201ENST00000355430 SERTM2A0A1B0GWG4 89 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 EFNA2O43921 213 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 RFPL3SP0C7P2 107 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 COX5BP10606 129 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 GNLYP22749 145 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 HLA-DRB5Q30154 266 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF714Q96N38 554 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 RPRMQ9NS64 109 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF785A8K8V0 405 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 RBP4P02753 201 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 ADCYAP1P18509 176 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 WDR73Q6P4I2 378 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 TMEM45BQ96B21 275 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 JMJD8Q96S16 334 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 COLCA2A8K830 154 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 J3QKU1 62 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 TOX4O94842 621 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 CD5P06127 495 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 TNXAQ16473 311 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 OR5R1Q8NH85 324 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF418Q8TF45 676 aaPredicted RBP10.48□□□□□ -0.73
COLCA1-201ENST00000355430 Q8WTZ3 238 aa10.48□□□□□ -0.73
COLCA1-201ENST00000355430 SNRNP40Q96DI7 357 aaKnown RBP10.48□□□□□ -0.73
COLCA1-201ENST00000355430 TRBV6-7A0A0A0MS04 114 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 LRRC3CA6NJW4 275 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 ZIC3O60481 467 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 CT45A10P0DMU9 189 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 OR8G5Q8NG78 346 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 DYNLRB2Q8TF09 96 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 BLNKQ8WV28 456 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 TBX15Q96SF7 602 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 LINC00470Q9BZP3 86 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 SLC25A5P05141 298 aaKnown RBP10.47□□□□□ -0.73
COLCA1-201ENST00000355430 CELA3AP09093 270 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 PRDX2P32119 198 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 SRSF4Q08170 494 aaKnown RBP10.47□□□□□ -0.73
COLCA1-201ENST00000355430 VAMP3Q15836 100 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 VWA1Q6PCB0 445 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF826PQ6ZT77 177 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 OR5AU1Q8NGC0 362 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 A0A1W2PPE3 182 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 SNURFLB1AK76 121 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 FAM106CPP0CH98 169 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 TNFRSF9Q07011 255 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 MRPL54Q6P161 138 aaKnown RBP10.47□□□□□ -0.73
COLCA1-201ENST00000355430 LHFPL1Q86WI0 220 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 FAM222BQ8WU58 562 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 WFIKKN1Q96NZ8 548 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 DMRTA2Q96SC8 542 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 TMEM167BQ9NRX6 74 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
COLCA1-201ENST00000355430 ZG16O60844 167 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 QRFPP83859 136 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 MISP3Q96FF7 219 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 IL36RNQ9UBH0 155 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
COLCA1-201ENST00000355430 A0A0G2JMM0 328 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 A0A1W2PPB8 328 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 A0A1W2PRS3 328 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 KIR3DP1A8MWS1 328 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 J3QW42 95 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF253O75346 499 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 FAM157CP0CG43 387 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
COLCA1-201ENST00000355430 UBE2L3P68036 154 aaKnown RBP10.46□□□□□ -0.73
COLCA1-201ENST00000355430 CLDND2Q8NHS1 167 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 VN1R17PQ8TDU5 208 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 LSM10Q969L4 123 aaKnown RBP10.46□□□□□ -0.73
COLCA1-201ENST00000355430 CCL13Q99616 98 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 TUBA4BQ9H853 241 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 LOC105371242A0A075B767 164 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 USF1P22415 310 aaPredicted RBP10.46□□□□□ -0.73
COLCA1-201ENST00000355430 C17orf82Q86X59 251 aaPredicted RBP10.46□□□□□ -0.73
COLCA1-201ENST00000355430 RAB24Q969Q5 203 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 CBY1Q9Y3M2 126 aa10.46□□□□□ -0.73
COLCA1-201ENST00000355430 CACNA1EQ15878 2313 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 A0A1B0GV90 55 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 C5orf63A6NC05 138 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 K7ENP7 123 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 CD40P25942 277 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 CAMPP49913 170 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms