RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 CD3DP04234 171 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 GATA3P23771 443 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 DYNLT3P51808 116 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 SUCLG1P53597 346 aaKnown RBP4.37□□□□□ -1.71
CKAP5-202ENST00000354558 C2orf83Q53S99 150 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 PDZD11Q5EBL8 140 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 SVBPQ8N300 66 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 RAB24Q969Q5 203 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 TMEM30AQ9NV96 361 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 PTTG1O95997 202 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 ALPLP05186 524 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 TTC32Q5I0X7 151 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 S100A7L2Q5SY68 101 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 TCF24Q7RTU0 167 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 LDLRAD3Q86YD5 345 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 KIR3DL3Q8N743 410 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 ZNRF1Q8ND25 227 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 HMGCLL1Q8TB92 370 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 KCNS1Q96KK3 526 aa4.37□□□□□ -1.71
CKAP5-202ENST00000354558 ZNF430Q9H8G1 570 aaPredicted RBP4.37□□□□□ -1.71
CKAP5-202ENST00000354558 TRGV11A0A075B6L2 103 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 M0R381 172 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 GGCTO75223 188 aaKnown RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 UPK1BO75841 260 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 CA1P00915 261 aaPredicted RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 VAMP3Q15836 100 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 RUSC1-AS1Q66K80 236 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 FAM216BQ8N7L0 139 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 TMEM229BQ8NBD8 167 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 OR5H6Q8NGV6 325 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 OPN4Q9UHM6 478 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 TNS1Q9HBL0 1735 aaKnown RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 RFPL3SP0C7P2 107 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 LINC00869P0C866 280 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 B2MP61769 119 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 MRPL14Q6P1L8 145 aaKnown RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 OR4C5Q8NGB2 326 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 OR11H4Q8NGC9 324 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 OR5C1Q8NGR4 320 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 SEC11CQ9BY50 192 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 GSX2Q9BZM3 304 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 PSORS1C1Q9UIG5 152 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 EMCNQ9ULC0 261 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 TRBV7-9A0A0J9YWB2 115 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 NBR2O15453 112 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 CA11O75493 328 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 CTSDP07339 412 aaPredicted RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 C4orf48Q5BLP8 95 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 ATG4DQ86TL0 474 aaPredicted RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 ZCCHC24Q8N2G6 241 aaKnown RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 GTF3AQ92664 365 aaKnown RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 NUMA1Q14980 2115 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 A0A0G2JMM0 328 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 TEX48A0A1B0GUV7 120 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 A0A1W2PPB8 328 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 A0A1W2PRS3 328 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 MAP1LC3B2A6NCE7 125 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 KIR3DP1A8MWS1 328 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 H3BTX0 84 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 J3QR89 54 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 COX6CP09669 75 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 TMEM30BQ3MIR4 351 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 MIDNQ504T8 468 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 IGSF11Q5DX21 431 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 MESTQ5EB52 335 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 ZNF329Q86UD4 541 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 ZNF429Q86V71 674 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 RFLNBQ8N5W9 214 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 TBX15Q96SF7 602 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 MAP1LC3BQ9GZQ8 125 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 C21orf62Q9NYP8 219 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 SPRR3Q9UBC9 169 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 WDR90Q96KV7 1748 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 RBFOX2O43251 390 aaKnown RBP eCLIP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 CIDEAO60543 219 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 CELA3BP08861 270 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 GCAP28676 217 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 CKS2P33552 79 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 HMGA2P52926 109 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 RPS20P60866 119 aaKnown RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 ERVS71-1P61550 626 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 RAE1P78406 368 aaKnown RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 DMRTC2Q8IXT2 367 aaPredicted RBP4.36□□□□□ -1.71
CKAP5-202ENST00000354558 C2CD4CQ8TF44 421 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 EDA2RQ9HAV5 297 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 TNFSF18Q9UNG2 199 aa4.36□□□□□ -1.71
CKAP5-202ENST00000354558 CXorf1O96002 111 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 IGHV3-48P01763 117 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 TCRBP04435 133 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 RHOGP84095 191 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 CFHR3Q02985 330 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 RNF151Q2KHN1 245 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 C9orf66Q5T8R8 295 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 ZNF66Q6ZN08 573 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 OR10AC1Q8NH08 325 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 SPSB4Q96A44 273 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 PRELID3AQ96N28 172 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 RCHY1Q96PM5 261 aa4.35□□□□□ -1.71
CKAP5-202ENST00000354558 GSX1Q9H4S2 264 aaPredicted RBP4.35□□□□□ -1.71
CKAP5-202ENST00000354558 ZNF385DQ9H6B1 395 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms