RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 SLC25A4P12235 298 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 HSD17B10Q99714 261 aaKnown RBP9.19□□□□□ -0.94
SVIP-201ENST00000354193 RSG1Q9BU20 258 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 POMT1Q9Y6A1 747 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 ASH1LQ9NR48 2969 aaKnown RBP9.19□□□□□ -0.94
SVIP-201ENST00000354193 SAA2-SAA4A0A096LPE2 208 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 M0R036 132 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 ACAA1P09110 424 aaPredicted RBP9.19□□□□□ -0.94
SVIP-201ENST00000354193 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
SVIP-201ENST00000354193 SAA2P0DJI9 122 aaPredicted RBP9.19□□□□□ -0.94
SVIP-201ENST00000354193 MYOD1P15172 320 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 COL8A1P27658 744 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 ZNF266Q14584 549 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 TMEM65Q6PI78 240 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 DTD1Q8TEA8 209 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 PERPQ96FX8 193 aa9.19□□□□□ -0.94
SVIP-201ENST00000354193 MBNL3Q9NUK0 354 aaKnown RBP9.19□□□□□ -0.94
SVIP-201ENST00000354193 DBX1A6NMT0 343 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 RAB7AP51149 207 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 ZNF134P52741 427 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 HAGHQ16775 308 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 CT45A1Q5HYN5 189 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 ZNF788Q6ZQV5 615 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 OR10P1Q8NGE3 313 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 LILRB1Q8NHL6 650 aaPredicted RBP9.18□□□□□ -0.94
SVIP-201ENST00000354193 CT45A3Q8NHU0 189 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 RHOFQ9HBH0 211 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 UBE2KP61086 200 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 TOR2AQ5JU69 321 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 PXDC1Q5TGL8 231 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 JPT1Q9UK76 154 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 ANKRD17O75179 2603 aaKnown RBP9.18□□□□□ -0.94
SVIP-201ENST00000354193 IGSF23A1L1A6 192 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 ZFP92A6NM28 416 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 CD55P08174 381 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 PDLIM3Q53GG5 364 aaPredicted RBP9.18□□□□□ -0.94
SVIP-201ENST00000354193 TMEM200BQ69YZ2 307 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 PNKDQ8N490 385 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 OR4S2Q8NH73 311 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 INSIG2Q9Y5U4 225 aa9.18□□□□□ -0.94
SVIP-201ENST00000354193 PRRC2AP48634 2157 aaKnown RBP9.18□□□□□ -0.94
SVIP-201ENST00000354193 OR8U8P0C7N1 319 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 NQO2P16083 231 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 SSX2Q16385 188 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 CLLU1Q5K131 121 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 NRGNQ92686 78 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 NCBP2LA6PVI3 153 aaKnown RBP9.17□□□□□ -0.94
SVIP-201ENST00000354193 IGKV1-5P01602 117 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 C1QTNF12Q5T7M4 302 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 POM121Q96HA1 1249 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 CABLES2Q9BTV7 478 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 C20orf24Q9BUV8 137 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 LMO1P25800 156 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 FGF8P55075 233 aaPredicted RBP9.17□□□□□ -0.94
SVIP-201ENST00000354193 CCDC28AQ8IWP9 274 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 C18orf12Q96KH6 178 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 HELZ2Q9BYK8 2649 aaKnown RBP9.17□□□□□ -0.94
SVIP-201ENST00000354193 SLC25A17O43808 307 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 ATP5J2P56134 94 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 SLC38A11Q08AI6 406 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 QTRT1Q9BXR0 403 aaKnown RBP9.17□□□□□ -0.94
SVIP-201ENST00000354193 HES4Q9HCC6 221 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 TMEM140Q9NV12 185 aa9.17□□□□□ -0.94
SVIP-201ENST00000354193 TRAV3A0A0B4J244 114 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 C19orf84I3L1E1 186 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 ASB13Q8WXK3 278 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 ACY3Q96HD9 319 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 MRPL20Q9BYC9 149 aaKnown RBP9.16□□□□□ -0.94
SVIP-201ENST00000354193 RBKSQ9H477 322 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 TNFRSF19Q9NS68 423 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 TANC2Q9HCD6 1990 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 A0A1B0GU03 582 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 LEUTXA8MZ59 168 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 REG1AP05451 166 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 OR13C7P0DN81 318 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 ATP6V0CP27449 155 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 BTN1A1Q13410 526 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 MIDNQ504T8 468 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 ETV3LQ6ZN32 361 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 UBAC2Q8NBM4 344 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 OR13D1Q8NGV5 346 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 C22orf15Q8WYQ4 148 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 PRORYQ9H606 182 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 CBLN4Q9NTU7 201 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 ZNF729A6NN14 1252 aaPredicted RBP9.16□□□□□ -0.94
SVIP-201ENST00000354193 SIAH2O43255 324 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 HLA-GP17693 338 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 RAB2AP61019 212 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 ZNF585BQ52M93 769 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 C9orf152Q5JTZ5 239 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 ZNF525Q8N782 197 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 RAB40CQ96S21 281 aa9.16□□□□□ -0.94
SVIP-201ENST00000354193 PIGBOS1A0A0B4J2F0 54 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 HRASP01112 189 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 IL3RAP26951 378 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 DIAPH2-AS1Q14236 149 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 AANATQ16613 207 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 SSMEM1Q8WWF3 244 aa9.15□□□□□ -0.94
SVIP-201ENST00000354193 MARC2Q969Z3 335 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms