RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DEFB123Q8N688 67 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 OR2D3Q8NGH3 330 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 CORO2AQ92828 525 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 TMEM54Q969K7 222 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 DEPPQ9NTK1 212 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 HSPB7Q9UBY9 170 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 ARL2-SNX15V9GYD0 113 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 IGHV2OR16-5A0A0B4J2B6 119 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 A0A1W2PS18 150 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 LILRA5A6NI73 299 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 K7EP13 123 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 VAMP5O95183 116 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 CA6P23280 308 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 RPL31P62899 125 aaKnown RBP6.44□□□□□ -1.38
BRCA1-201ENST00000352993 H2BFWTQ7Z2G1 175 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 IFI44Q8TCB0 444 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 BCL2L2Q92843 193 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-201ENST00000352993 KCNS1Q96KK3 526 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-201ENST00000352993 R4GN57 208 aa6.44□□□□□ -1.38
BRCA1-201ENST00000352993 A0A096LPE4 126 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 A0A1W2PPZ6 126 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 LRP5LA4QPB2 252 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 TMPRSS2O15393 492 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 S1PR2O95136 353 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 ZNF83P51522 516 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 ZNF585BQ52M93 769 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 PLXDC1Q8IUK5 500 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 FGFBP3Q8TAT2 258 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 SSMEM1Q8WWF3 244 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 BADQ92934 168 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 FOXB1Q99853 325 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 CST9LQ9H4G1 147 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 COL6A3P12111 3177 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 EML6Q6ZMW3 1958 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 ODAMA1E959 279 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 H0Y8G0 127 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 RAMP3O60896 148 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 ZNF324O75467 553 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-201ENST00000352993 PIAS2O75928 621 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 COL4A2P08572 1712 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 RAC2P15153 192 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 PRRX1P54821 245 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 RIPPLY3P57055 190 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 RNASEKQ6P5S7 137 aaKnown RBP6.43□□□□□ -1.38
BRCA1-201ENST00000352993 DOLPP1Q86YN1 238 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 GCNT2Q8N0V5 402 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 SLC24A4Q8NFF2 622 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 MRGPRDQ8TDS7 321 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 SPACA9Q96E40 222 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-201ENST00000352993 CDX2Q99626 313 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-201ENST00000352993 ZPBPQ9BS86 351 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 OR2H1Q9GZK4 316 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 TMEM38BQ9NVV0 291 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 C5orf49A4QMS7 147 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 M0R2Z0 102 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 CTRLP40313 264 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 Q0VG73 95 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 IGFBP7Q16270 282 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 OCIAD2Q56VL3 154 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 MIC13Q5XKP0 118 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 TMEM42Q69YG0 159 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 DRAM1Q8N682 238 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 NUDT11Q96G61 164 aa6.43□□□□□ -1.38
BRCA1-201ENST00000352993 GSX1Q9H4S2 264 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-201ENST00000352993 IGHV2-70DA0A0C4DH43 119 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 DUX1O43812 170 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 ACTL6BO94805 426 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 CA2P00918 260 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 CD1BP29016 333 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 PTGDSP41222 190 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 SLC25A53Q5H9E4 307 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 RNASE7Q9H1E1 156 aaKnown RBP6.42□□□□□ -1.38
BRCA1-201ENST00000352993 ZNF331Q9NQX6 463 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-201ENST00000352993 A0A0J9YW62 118 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 TOX4O94842 621 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 NUDT3O95989 172 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 GNG4P50150 75 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 LGALS4P56470 323 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 PCBD1P61457 104 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 MPV17L2Q567V2 206 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 PRR31Q5SQ13 230 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 AMMECR1LQ6DCA0 310 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 WDR73Q6P4I2 378 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 YRDCQ86U90 279 aaKnown RBP6.42□□□□□ -1.38
BRCA1-201ENST00000352993 GMPPAQ96IJ6 420 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-201ENST00000352993 REPIN1Q9BWE0 567 aaKnown RBP6.42□□□□□ -1.38
BRCA1-201ENST00000352993 CLEC7AQ9BXN2 247 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 FAM234AQ9H0X4 552 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 OR2D2Q9H210 308 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 HEYLQ9NQ87 328 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-201ENST00000352993 TP73-AS1Q9UF72 201 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 CD207Q9UJ71 328 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 KIAA1549Q9HCM3 1950 aa6.42□□□□□ -1.38
BRCA1-201ENST00000352993 TRAV30A0A087WSZ9 112 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 LRRC30A6NM36 301 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 K7ERU9 68 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 RAB29O14966 203 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 RNPS1Q15287 305 aaKnown RBP6.41□□□□□ -1.38
BRCA1-201ENST00000352993 CLEC2AQ6UVW9 174 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms