RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ABI3Q9P2A4 366 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 hDV102S1A0JD36 115 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 LRP5LA4QPB2 252 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 J3QR06 171 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 M0R2Z0 102 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 MT-ND6P03923 174 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 LINC00869P0C866 280 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 TBR1Q16650 682 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 WDR73Q6P4I2 378 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 C16orf47Q6ZP98 133 aaPredicted RBP11.15□□□□□ -0.62
IFT88-202ENST00000351808 OR8B3Q8NGG8 313 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 OR8B2Q96RD0 313 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 HES4Q9HCC6 221 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 V9GYV3 84 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 A0A087X0K7 114 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 FAM231BA6NCW3 169 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 EFNA2O43921 213 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 OTX1P32242 354 aaPredicted RBP11.15□□□□□ -0.62
IFT88-202ENST00000351808 GPR6P46095 362 aaPredicted RBP11.15□□□□□ -0.62
IFT88-202ENST00000351808 NINJ1Q92982 152 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 LSM10Q969L4 123 aaKnown RBP11.15□□□□□ -0.62
IFT88-202ENST00000351808 C10orf35Q96D05 121 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 BMFQ96LC9 184 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 GTSF1LQ9H1H1 148 aa11.15□□□□□ -0.62
IFT88-202ENST00000351808 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 CLDN14O95500 239 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 AZU1P20160 251 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 SMAGPQ0VAQ4 97 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 SCGB2A2Q13296 93 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 CNN3Q15417 329 aaKnown RBP11.14□□□□□ -0.63
IFT88-202ENST00000351808 SLC25A34Q6PIV7 304 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 UBALD2Q8IYN6 164 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 SCCPDHQ8NBX0 429 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 GJC3Q8NFK1 279 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 C18orf32Q8TCD1 76 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 CHODLQ9H9P2 273 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 SMPXQ9UHP9 88 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 PILRBQ9UKJ0 227 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 A0A1B0GV72 72 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 C7orf71A4D174 169 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 BLACEA4D250 179 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 OR4C46A6NHA9 309 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 HAND1O96004 215 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 CX3CL1P78423 397 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 GABRA6Q16445 453 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 SLC25A40Q8TBP6 338 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 STRADBQ9C0K7 418 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 ATP23Q9Y6H3 246 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 MUC22E2RYF6 1773 aaPredicted RBP11.14□□□□□ -0.63
IFT88-202ENST00000351808 THADAQ6YHU6 1953 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 A0A1W2PPV4 95 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 MT-CO2P00403 227 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 GUCA1AP43080 201 aaPredicted RBP11.14□□□□□ -0.63
IFT88-202ENST00000351808 RPL31P62899 125 aaKnown RBP11.14□□□□□ -0.63
IFT88-202ENST00000351808 HLA-BQ31612 363 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 LHX8Q68G74 356 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 UFSP1Q6NVU6 142 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 LHFPL2Q6ZUX7 228 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 OR10G3Q8NGC4 313 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 LMX1AQ8TE12 382 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 GPR27Q9NS67 375 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 PLEK2Q9NYT0 353 aa11.14□□□□□ -0.63
IFT88-202ENST00000351808 EDDM3BP56851 147 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 FXYD3Q14802 87 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 Q6ZSR3 168 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 OR1F12Q8NHA8 337 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 CPT1CQ8TCG5 803 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 PPP1R3CQ9UQK1 317 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 OR51B2Q9Y5P1 312 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 PPIAL4EA0A075B759 164 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 PPIAL4CA0A0B4J2A2 164 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 PPIAL4DF5H284 164 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 ARL14EPLP0DKL9 152 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 PPIAL4FP0DN26 164 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 TMEM38BQ9NVV0 291 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 C19orf25Q9UFG5 118 aaPredicted RBP11.13□□□□□ -0.63
IFT88-202ENST00000351808 CACNA1DQ01668 2161 aa11.13□□□□□ -0.63
IFT88-202ENST00000351808 APCSP02743 223 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 PCSK4Q6UW60 755 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 ST8SIA1Q92185 356 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
IFT88-202ENST00000351808 NAA38Q9BRA0 125 aaKnown RBP11.12□□□□□ -0.63
IFT88-202ENST00000351808 HS3ST3A1Q9Y663 406 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 MED12LQ86YW9 2145 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 PPOXP50336 477 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 ZNF585BQ52M93 769 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 OR10W1Q8NGF6 305 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
IFT88-202ENST00000351808 OR2D2Q9H210 308 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 DEPPQ9NTK1 212 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 PCDH15Q96QU1 1955 aa11.12□□□□□ -0.63
IFT88-202ENST00000351808 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 TMEM150CB9EJG8 249 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 RRHO14718 337 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 SLAQ13239 276 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 TMEM95Q3KNT9 176 aa11.11□□□□□ -0.63
IFT88-202ENST00000351808 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms