RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TNXAQ16473 311 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 C5orf17Q8NAS9 161 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 MRPL24Q96A35 216 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 PERPQ96FX8 193 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 OR2V2Q96R30 315 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 OR8B2Q96RD0 313 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 HSD17B10Q99714 261 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 ANKRD31Q8N7Z5 1873 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 J3QR06 171 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 KLF4O43474 513 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 FOXS1O43638 330 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 KLF7O75840 302 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 SERF1AO75920 110 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 C1QL1O75973 258 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 HMGA2P52926 109 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 GCSAMLQ5JQS6 135 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 ZNF841Q6ZN19 808 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 FRRS1LQ9P0K9 344 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 CCL21O00585 134 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 KBTBD11O94819 623 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 FAM89BQ8N5H3 189 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 TMEM204Q9BSN7 226 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 SHANK3Q9BYB0 1731 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 CD300EQ496F6 205 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 C9orf153Q5TBE3 101 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 STPG1Q5TH74 334 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 PMS2CLQ68D20 193 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 ADAMTSL5Q6ZMM2 481 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 A0A1W2PQD3 144 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 GAGE12HA6NDE8 117 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 PGPEP1LA6NFU8 196 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 CD5LO43866 347 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 NEUROG1Q92886 237 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 RAB1CQ92928 201 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 GPR35Q9HC97 309 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 IGHV2-5P01817 119 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 UBE2L3P68036 154 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 GDF15Q99988 308 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 SH2D2AQ9NP31 389 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 FOCADQ5VW36 1801 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 SOCS1O15524 211 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 SLC25A5P05141 298 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 LIFP15018 202 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 IGFBP7Q16270 282 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 ANKRD55Q3KP44 614 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 ZNF721Q8TF20 911 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 TTTY12Q9BZ98 90 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 TMEM167BQ9NRX6 74 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 SPAG17Q6Q759 2223 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 TRAV9-1A0A075B6T8 112 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 SMIM17P0DL12 118 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 IL11P20809 199 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 ADMP35318 185 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 HERV-K104P63124 156 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 ABHD14AQ9BUJ0 271 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 C1orf43Q9BWL3 253 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 OR2H1Q9GZK4 316 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 SH3BGRL3Q9H299 93 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 AAMDCQ9H7C9 122 aa9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-202ENST00000348513 FNDC7Q5VTL7 733 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 WDR31Q8NA23 367 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 MYOZ3Q8TDC0 251 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 ATXN7O15265 892 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 VENTXO95231 258 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 SP1P08047 785 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 ORM2P19652 201 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 TSPOP30536 169 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 GPR27Q9NS67 375 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 COL11A2P13942 1736 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 K7ESF4 209 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 IGKV1D-16P01601 117 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 LYZP61626 148 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 ZBTB34Q8NCN2 500 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 SLC25A40Q8TBP6 338 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 MESP1Q9BRJ9 268 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 TRAV38-1A0A0B4J264 116 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 K7EP13 123 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 NKX2-8O15522 239 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 PPBPP02775 128 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 LIAT1Q6ZQX7 453 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 OR1L4Q8NGR5 311 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 B5MCH6 92 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 SNAI2O43623 268 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 CXorf1O96002 111 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 CBLN1P23435 193 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 PIGYQ3MUY2 71 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 NR2C2APQ86WQ0 139 aa9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 C11orf68Q9H3H3 251 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-202ENST00000348513 CEACAM3P40198 252 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 OR52M1Q8NGK5 317 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 SF3B5Q9BWJ5 86 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 AMMECR1Q9Y4X0 333 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 MPC1Q9Y5U8 109 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 TRAV14DV4A0A0A6YYC5 116 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 BGLAPP02818 100 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 MDP1Q86V88 176 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms