RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CDK10Q15131 360 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 PDLIM3Q53GG5 364 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 AKIRIN2Q53H80 203 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 ACTBL2Q562R1 376 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 LCNL1Q6ZST4 164 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 GVQW1Q8N7I0 195 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 ZBTB34Q8NCN2 500 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 OR5M8Q8NGP6 311 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 GRPEL2Q8TAA5 225 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 C4orf3Q8WVX3 66 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 TCTEX1D2Q8WW35 142 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 UBE2E2Q96LR5 201 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 AIFM2Q9BRQ8 373 aa12.35□□□□□ -0.43
TSPAN4-201ENST00000346501 FCN1O00602 326 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 NOL3O60936 208 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 FCGR3BO75015 233 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 GABARAPO95166 117 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 SMIM18P0DKX4 95 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 IGLL1P15814 213 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 PPIFP30405 207 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 RAB9AP51151 201 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 TAS2R46P59540 309 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 CATR1Q13166 79 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 BEAN1Q3B7T3 259 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 ZNF66Q6ZN08 573 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 MRPL41Q8IXM3 137 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 TEX45Q8NA69 505 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 MINDY2Q8NBR6 621 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 OR4S2Q8NH73 311 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 SECTM1Q8WVN6 248 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 TMEM68Q96MH6 324 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 PHB2Q99623 299 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 ZNF355PQ9NSJ1 428 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 TRRAPQ9Y4A5 3859 aa12.34□□□□□ -0.43
TSPAN4-201ENST00000346501 NOTCH3Q9UM47 2321 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 MEIS3P1A6NDR6 274 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 PPYP01298 95 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 IGLV1-40P01703 118 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 FCER2P06734 321 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 ZNF182P17025 639 aaPredicted RBP12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 KIR2DS2P43631 304 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 MSMO1Q15800 293 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 LINC00482Q8N8I6 264 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 LFNGQ8NES3 379 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 OR5H2Q8NGV7 314 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 VSTM2AQ8TAG5 236 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 GIMAP1Q8WWP7 306 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 SLC5A7Q9GZV3 580 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 SLA2Q9H6Q3 261 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 EHFQ9NZC4 300 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 NUBP2Q9Y5Y2 271 aa12.33□□□□□ -0.44
TSPAN4-201ENST00000346501 LINC00473A8K010 186 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 MPPED1O15442 326 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 WIPF1O43516 503 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 PTHLHP12272 177 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 AADACP22760 399 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 S100GP29377 79 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 FXYD4P59646 89 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 UBE2KP61086 200 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 NDPQ00604 133 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 POC5Q8NA72 575 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 C15orf40Q8WUR7 153 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 DDB2Q92466 427 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 P2RX4Q99571 388 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 FAM103A1Q9BTL3 118 aaKnown RBP12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 SCPEP1Q9HB40 452 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 TAS2R8Q9NYW2 309 aa12.32□□□□□ -0.44
TSPAN4-201ENST00000346501 NOTCH1P46531 2555 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 VWFP04275 2813 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 IGKV1D-13A0A0B4J2D9 117 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 HRASP01112 189 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 IGLV2-23P01705 113 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 EIF4EP06730 217 aaKnown RBP12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 OR8U8P0C7N1 319 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 IGKV1-13P0DP09 117 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 TNXAQ16473 311 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 CTF1Q16619 201 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 OR2B11Q5JQS5 317 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 OVCH2Q7RTZ1 564 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 SNX29P2Q8IUI4 249 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 MFSD4AQ8N468 514 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 C5orf30Q96GV9 206 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 RAX2Q96IS3 184 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 ADAM30Q9UKF2 790 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 FBXO7Q9Y3I1 522 aa12.31□□□□□ -0.44
TSPAN4-201ENST00000346501 H3BUA1 57 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 SULT1C2O00338 296 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 HPGDSO60760 199 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 ALDH3B2P48448 385 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 TPPP2P59282 170 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 TSPAN5P62079 268 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 ZNF616Q08AN1 781 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 ETV3LQ6ZN32 361 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 TMEM17Q86X19 198 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 MMD2Q8IY49 270 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 OR11H1Q8NG94 326 aa12.3□□□□□ -0.44
TSPAN4-201ENST00000346501 OR1N2Q8NGR9 330 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 1221.9 ms