RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CALYQ9NYX4 217 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 SLC25A10Q9UBX3 287 aaPredicted RBP11.14□□□□□ -0.63
CASC4-202ENST00000345795 LAMP3Q9UQV4 416 aa11.14□□□□□ -0.63
CASC4-202ENST00000345795 SORL1Q92673 2214 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 LINC00473A8K010 186 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 PAGE4O60829 102 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 SLC35B3Q9H1N7 401 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 IL36GQ9NZH8 169 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 IGKV1-5P01602 117 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 MSMPQ1L6U9 139 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 RBMXL3Q8N7X1 1067 aaKnown RBP11.13□□□□□ -0.63
CASC4-202ENST00000345795 GALNT14Q96FL9 552 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 WFIKKN1Q96NZ8 548 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 SLC35D1Q9NTN3 355 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 KPTNQ9Y664 436 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 IGHV3OR16-10A0A075B7F0 116 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 TRBV6-7A0A0A0MS04 114 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 NDUFB3O43676 98 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 TNFSF13O75888 250 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 YIF1AO95070 293 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 COX5BP10606 129 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 ARL16Q0P5N6 197 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 MIC13Q5XKP0 118 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 ZNF324BQ6AW86 544 aaPredicted RBP11.13□□□□□ -0.63
CASC4-202ENST00000345795 H1FOOQ8IZA3 346 aaPredicted RBP11.13□□□□□ -0.63
CASC4-202ENST00000345795 GCSAMQ8N6F7 178 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
CASC4-202ENST00000345795 SSX3Q99909 188 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 FAM117AQ9C073 453 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 TNFRSF19Q9NS68 423 aa11.13□□□□□ -0.63
CASC4-202ENST00000345795 LYRM2Q9NU23 88 aaPredicted RBP11.13□□□□□ -0.63
CASC4-202ENST00000345795 CISD1Q9NZ45 108 aaKnown RBP11.13□□□□□ -0.63
CASC4-202ENST00000345795 PGPEP1LA6NFU8 196 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 CD82P27701 267 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 RPS23P62266 143 aaKnown RBP11.12□□□□□ -0.63
CASC4-202ENST00000345795 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 FAM90A1Q86YD7 464 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 DOLPP1Q86YN1 238 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 MISP3Q96FF7 219 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 RAB40CQ96S21 281 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 PKIBQ9C010 78 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 ZDHHC8Q9ULC8 765 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 H3BQ15 152 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 ZNF737O75373 536 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 S100PP25815 95 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 RTP5Q14D33 572 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 MRPS18CQ9Y3D5 142 aaKnown RBP11.12□□□□□ -0.63
CASC4-202ENST00000345795 IFNA1P01562 189 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 TNFRSF1AP19438 455 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 UCP1P25874 307 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 DLK1P80370 383 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 C18orf12Q96KH6 178 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 HARBI1Q96MB7 349 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 OR5B12Q96R08 314 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 MYOZ1Q9NP98 299 aaPredicted RBP11.12□□□□□ -0.63
CASC4-202ENST00000345795 NDRG3Q9UGV2 375 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 FAM215AQ9Y5M1 114 aa11.12□□□□□ -0.63
CASC4-202ENST00000345795 A0A0G2JNJ9 132 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 ASPHD1Q5U4P2 390 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 Q9UFV3 132 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 SELENOKQ9Y6D0 94 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 ACANP16112 2415 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 OPRK1P41145 380 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 PSMB3P49720 205 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 TNFRSF9Q07011 255 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 Q6P435 159 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 ZNF497Q6ZNH5 498 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 MOB1BQ7L9L4 216 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 OR51G1Q8NGK1 321 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 NUDT16L1Q9BRJ7 211 aaKnown RBP11.11□□□□□ -0.63
CASC4-202ENST00000345795 TPPP3Q9BW30 176 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 NGBQ9NPG2 151 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 IQCF6A8MYZ5 107 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 MDH2P40926 338 aaKnown RBP11.11□□□□□ -0.63
CASC4-202ENST00000345795 THBS3P49746 956 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 TCL1AP56279 114 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 ARF6P62330 175 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 MLANAQ16655 118 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 HFEQ30201 348 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 NANPQ8TBE9 248 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 SSC4DQ8WTU2 575 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 DKK4Q9UBT3 224 aa11.11□□□□□ -0.63
CASC4-202ENST00000345795 RAB19A4D1S5 217 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 MMP23AO75900 390 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 ORM2P19652 201 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 CD200P41217 278 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 C9orf152Q5JTZ5 239 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 IGKV1D-17A0A075B6S4 117 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 NCBP2LA6PVI3 153 aaKnown RBP11.1□□□□□ -0.63
CASC4-202ENST00000345795 ZNF645Q8N7E2 425 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 NHLRC2Q8NBF2 726 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 OR5D13Q8NGL4 314 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 ASB13Q8WXK3 278 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 CABLES2Q9BTV7 478 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms