RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 REG1BP48304 166 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 ARHGDIBP52566 201 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 CBX3Q13185 183 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 PPP1R1AQ13522 171 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 TATDN3Q17R31 274 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 OR2B11Q5JQS5 317 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 Q6ZNX1 250 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 ODF3L1Q8IXM7 274 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 DRAXINQ8NBI3 349 aaPredicted RBP11.07□□□□□ -0.64
TPM4-202ENST00000344824 BVESQ8NE79 360 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 CASTOR1Q8WTX7 329 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 RTN4IP1Q8WWV3 396 aaPredicted RBP11.07□□□□□ -0.64
TPM4-202ENST00000344824 ZNF486Q96H40 463 aaPredicted RBP11.07□□□□□ -0.64
TPM4-202ENST00000344824 NPFFR1Q9GZQ6 430 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 PRR13Q9NZ81 148 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 PIPOXQ9P0Z9 390 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 PITPNC1Q9UKF7 332 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 AMMECR1Q9Y4X0 333 aaPredicted RBP11.07□□□□□ -0.64
TPM4-202ENST00000344824 ALG5Q9Y673 324 aa11.07□□□□□ -0.64
TPM4-202ENST00000344824 PGLYRP1O75594 196 aaPredicted RBP11.06□□□□□ -0.64
TPM4-202ENST00000344824 SLC22A5O76082 557 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 HLA-AP01891 365 aaKnown RBP11.06□□□□□ -0.64
TPM4-202ENST00000344824 IL3RAP26951 378 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 LINC00205P59089 165 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 DIAPH2-AS1Q14236 149 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 SP6Q3SY56 376 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 SGPP2Q8IWX5 399 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 LINC00311Q8N616 119 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 OR2T6Q8NHC8 308 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 PIFOQ8TCI5 191 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 TCTEX1D2Q8WW35 142 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 RPEQ96AT9 228 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 AKR1E2Q96JD6 320 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 S1PR3Q99500 378 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 NAA60Q9H7X0 242 aa11.06□□□□□ -0.64
TPM4-202ENST00000344824 CRYM-AS1A6NIL9 109 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 BUB1B-PAK6H3BSN5 160 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 MPPED1O15442 326 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 TSPAN9O75954 239 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 IGLV1-47P01700 117 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 UBE2MP61081 183 aaKnown RBP11.05□□□□□ -0.64
TPM4-202ENST00000344824 RND3P61587 244 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 TMEM128Q5BJH2 165 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 GLDNQ6ZMI3 551 aaPredicted RBP11.05□□□□□ -0.64
TPM4-202ENST00000344824 C8orf31Q8N9H6 132 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 SGMS2Q8NHU3 365 aa11.05□□□□□ -0.64
TPM4-202ENST00000344824 C9orf170A2RU37 121 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 A6NDX4 124 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 PRAF2O60831 178 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 PROP1O75360 226 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 OR5AC1P0C628 307 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 BRS3P32247 399 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 MECP2P51608 486 aaKnown RBP11.04□□□□□ -0.64
TPM4-202ENST00000344824 PROK1P58294 105 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 RPL30P62888 115 aaKnown RBP11.04□□□□□ -0.64
TPM4-202ENST00000344824 SUPT4H1P63272 117 aaKnown RBP11.04□□□□□ -0.64
TPM4-202ENST00000344824 DHRS2Q13268 280 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 LIN54Q6MZP7 749 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 KCTD9Q7L273 389 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 LYG2Q86SG7 212 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 UXS1Q8NBZ7 420 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.04□□□□□ -0.64
TPM4-202ENST00000344824 RBMXL1Q96E39 390 aaKnown RBP11.04□□□□□ -0.64
TPM4-202ENST00000344824 ZNF251Q9BRH9 671 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 MRPL20Q9BYC9 149 aaKnown RBP11.04□□□□□ -0.64
TPM4-202ENST00000344824 C16orf95Q9H693 158 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 GPN1Q9HCN4 374 aaPredicted RBP11.04□□□□□ -0.64
TPM4-202ENST00000344824 TRRAPQ9Y4A5 3859 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 MGAM2Q2M2H8 2515 aa11.04□□□□□ -0.64
TPM4-202ENST00000344824 WNK1Q9H4A3 2382 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 C3orf85A0A1B0GTC6 90 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 LINC00473A8K010 186 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 SFT2D2O95562 160 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 IL5P05113 134 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 DUTP33316 252 aaKnown RBP11.03□□□□□ -0.64
TPM4-202ENST00000344824 KRTAP10-3P60369 221 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 DHODHQ02127 395 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 CATR1Q13166 79 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 HABP2Q14520 560 aaPredicted RBP11.03□□□□□ -0.64
TPM4-202ENST00000344824 MSMO1Q15800 293 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 CCDC144NLQ6NUI1 221 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 C11orf88Q6PI97 169 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 ZNF833PQ6ZTB9 187 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 TGIF2LXQ8IUE1 241 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 KLHDC1Q8N7A1 406 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 ZNF431Q8TF32 576 aaPredicted RBP11.03□□□□□ -0.64
TPM4-202ENST00000344824 TP53RKQ96S44 253 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 HSD17B10Q99714 261 aaKnown RBP11.03□□□□□ -0.64
TPM4-202ENST00000344824 ALX4Q9H161 411 aaPredicted RBP11.03□□□□□ -0.64
TPM4-202ENST00000344824 RANBP3Q9H6Z4 567 aaPredicted RBP11.03□□□□□ -0.64
TPM4-202ENST00000344824 KCNIP3Q9Y2W7 256 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 PKD1L1Q8TDX9 2849 aa11.03□□□□□ -0.64
TPM4-202ENST00000344824 SSNA1O43805 119 aa11.02□□□□□ -0.64
TPM4-202ENST00000344824 CREBL2O60519 120 aaPredicted RBP11.02□□□□□ -0.64
TPM4-202ENST00000344824 ANXA3P12429 323 aa11.02□□□□□ -0.64
TPM4-202ENST00000344824 F2RP25116 425 aa11.02□□□□□ -0.64
TPM4-202ENST00000344824 DYNLT3P51808 116 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms