RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 AIREO43918 545 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 IGLV2-14P01704 120 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 HLA-DQB1P01920 261 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 PTHLHP12272 177 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 RPS19P39019 145 aaKnown RBP11.19□□□□□ -0.62
HMGN3-202ENST00000344726 LSM3P62310 102 aaKnown RBP11.19□□□□□ -0.62
HMGN3-202ENST00000344726 RUNX1Q01196 453 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 MRGPRG-AS1Q2M3A8 158 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 TMEM177Q53S58 311 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 CNIH2Q6PI25 160 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 GVQW1Q8N7I0 195 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 LFNGQ8NES3 379 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 HARBI1Q96MB7 349 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 MCRIP2Q9BUT9 160 aaKnown RBP11.19□□□□□ -0.62
HMGN3-202ENST00000344726 ALX4Q9H161 411 aaPredicted RBP11.19□□□□□ -0.62
HMGN3-202ENST00000344726 ANXA10Q9UJ72 324 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 SPATA2Q9UM82 520 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 VSIG4Q9Y279 399 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 OR2W1Q9Y3N9 320 aa11.19□□□□□ -0.62
HMGN3-202ENST00000344726 KMT2CQ8NEZ4 4911 aaKnown RBP11.18□□□□□ -0.62
HMGN3-202ENST00000344726 CTXN2P0C2S0 81 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 LGALS7P47929 136 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 FXYD3Q14802 87 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 TIMM50Q3ZCQ8 353 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 AKIRIN2Q53H80 203 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 ARPC1AQ92747 370 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 AUNIPQ9H7T9 357 aa11.18□□□□□ -0.62
HMGN3-202ENST00000344726 SHOXO15266 292 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 TUSC2O75896 110 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 RPL30P62888 115 aaKnown RBP11.17□□□□□ -0.62
HMGN3-202ENST00000344726 TAGLNQ01995 201 aaKnown RBP11.17□□□□□ -0.62
HMGN3-202ENST00000344726 TMEM267Q0VDI3 215 aaPredicted RBP11.17□□□□□ -0.62
HMGN3-202ENST00000344726 ACTBL2Q562R1 376 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 C11orf87Q6NUJ2 197 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 TCTEX1D1Q8N7M0 179 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 OR5M8Q8NGP6 311 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 OR1N2Q8NGR9 330 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 GRPEL2Q8TAA5 225 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 GPR61Q9BZJ8 451 aa11.17□□□□□ -0.62
HMGN3-202ENST00000344726 A0A0A6YYH2 397 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 A6NJ64 397 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 CRYZL1O95825 349 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 FCER2P06734 321 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 RRASP10301 218 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 ZNF616Q08AN1 781 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 EIF4EBP1Q13541 118 aaPredicted RBP11.16□□□□□ -0.62
HMGN3-202ENST00000344726 RTL8BQ17RB0 113 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 HOGA1Q86XE5 327 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 DPF1Q92782 380 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 ADTRPQ96IZ2 230 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 MS4A10Q96PG2 267 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 VCX3AQ9NNX9 186 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 SCOCQ9UIL1 159 aa11.16□□□□□ -0.62
HMGN3-202ENST00000344726 RBMX2Q9Y388 322 aaKnown RBP11.16□□□□□ -0.62
HMGN3-202ENST00000344726 MEIS3P1A6NDR6 274 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 SEC14L6B5MCN3 397 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 TMEM127O75204 238 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.62
HMGN3-202ENST00000344726 CBX3Q13185 183 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 PYHIN1Q6K0P9 492 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 IDO2Q6ZQW0 420 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 CROCCP3Q8IVE0 287 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 SNAPC3Q92966 411 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 GPHA2Q96T91 129 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 FUNDC2Q9BWH2 189 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 DIABLOQ9NR28 239 aa11.15□□□□□ -0.62
HMGN3-202ENST00000344726 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 A0A087WW49 117 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 XRCC3O43542 346 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 FCGR3BO75015 233 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 CNIH1O95406 144 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 OR8U8P0C7N1 319 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 SMIM18P0DKX4 95 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 AADACP22760 399 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 SLURP1P55000 103 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 BRWD1-AS2P59051 145 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 TPPP2P59282 170 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 UBE2KP61086 200 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 NCS1P62166 190 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 DGCR2P98153 550 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 UBE2NLQ5JXB2 153 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 C9orf66Q5T8R8 295 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 KCTD9Q7L273 389 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 SAMD12Q8N8I0 201 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 DCUN1D4Q92564 292 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 SLC25A46Q96AG3 418 aa11.14□□□□□ -0.63
HMGN3-202ENST00000344726 HUWE1Q7Z6Z7 4374 aaKnown RBP11.14□□□□□ -0.63
HMGN3-202ENST00000344726 SLC22A5O76082 557 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 SAA1P0DJI8 122 aaPredicted RBP11.13□□□□□ -0.63
HMGN3-202ENST00000344726 APELAP0DMC3 54 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 FCGR2CP31995 323 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 ARPC4P59998 168 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms