RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 NAT8BQ9UHF3 227 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 PSG11Q9UQ72 335 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 WASHC3Q9Y3C0 194 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 CNOT1A5YKK6 2376 aaKnown RBP6.89□□□□□ -1.31
ATG4A-201ENST00000343524 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 GAGE10A6NGK3 116 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 TNFSF12O43508 249 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 TUSC2O75896 110 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 NXPH3O95157 252 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 NDUFB4O95168 129 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 MT-CO2P00403 227 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 IGKV1D-33P01593 117 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 IGKV1-33P01594 117 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 AMY1AP04745 511 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 IGLC1P0CG04 106 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF83P51522 516 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 GFRA1P56159 465 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 RIPPLY3P57055 190 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 SELENOVP59797 346 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 UBE2G1P62253 170 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 SEC11AP67812 179 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 HIST1H1AQ02539 215 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-201ENST00000343524 TBR1Q16650 682 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 PHYHD1Q5SRE7 291 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 RASL11AQ6T310 242 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 TMEM14EPQ6UXP3 125 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 Q6ZVH6 145 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 BHLHA15Q7RTS1 189 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-201ENST00000343524 GJC3Q8NFK1 279 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 CYYR1Q96J86 154 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 SGCZQ96LD1 299 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 WNT10AQ9GZT5 417 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 LIN7CQ9NUP9 197 aaKnown RBP6.89□□□□□ -1.31
ATG4A-201ENST00000343524 MED29Q9NX70 200 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 PLA2G3Q9NZ20 509 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF391Q9UJN7 358 aa6.89□□□□□ -1.31
ATG4A-201ENST00000343524 USP9XQ93008 2570 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-201ENST00000343524 OR2T8A6NH00 312 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 TLX3O43711 291 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-201ENST00000343524 OR10J4P0C629 311 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 IAPPP10997 89 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 NPY1RP25929 384 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 DRD3P35462 400 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 PSG9Q00887 426 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 SLC25A47Q6Q0C1 308 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 MMD2Q8IY49 270 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 SPTSSAQ969W0 71 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF524Q96C55 264 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 LYZL4Q96KX0 146 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF48Q96MX3 618 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-201ENST00000343524 ULBP2Q9BZM5 246 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 RTN4RQ9BZR6 473 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 CACNG5Q9UF02 275 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 RNF114Q9Y508 228 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 COL5A1P20908 1838 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-201ENST00000343524 ODAMA1E959 279 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 RER1O15258 196 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 HSBP1O75506 76 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 PGLYRP1O75594 196 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF205O95201 554 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 NPPCP23582 126 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 GPR6P46095 362 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-201ENST00000343524 RBM11P57052 281 aaKnown RBP6.88□□□□□ -1.31
ATG4A-201ENST00000343524 CX3CL1P78423 397 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 PSG4Q00888 419 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 ARL16Q0P5N6 197 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 CST6Q15828 149 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 KRTCAP3Q53RY4 240 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 SPANXN5Q5MJ07 72 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 HAPLN4Q86UW8 402 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 OR8B3Q8NGG8 313 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 TSKUQ8WUA8 353 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 CLUHP3Q96NS8 147 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 OR8B2Q96RD0 313 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
ATG4A-201ENST00000343524 CACNA1CQ13936 2221 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 A0A1W2PPV4 95 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 TMEM150CB9EJG8 249 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 F2Z2F3 143 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 CCL16O15467 120 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 NUDT3O95989 172 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 POU2F2P09086 479 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 PVRP15151 417 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 IGLL1P15814 213 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 TMEM95Q3KNT9 176 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF439Q8NDP4 499 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 GATAD1Q8WUU5 269 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 LRRC61Q9BV99 259 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 SSBP4Q9BWG4 385 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-201ENST00000343524 CLEC7AQ9BXN2 247 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 NPCDR1Q9BY65 106 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 SAP30LQ9HAJ7 183 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 FGF22Q9HCT0 170 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 ABI3Q9P2A4 366 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 ARL2-SNX15V9GYD0 113 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 ADAMTS9Q9P2N4 1935 aa6.87□□□□□ -1.31
ATG4A-201ENST00000343524 THADAQ6YHU6 1953 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms