RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 GPHA2Q96T91 129 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 LAMTOR2Q9Y2Q5 125 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 OR51B2Q9Y5P1 312 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 HYAL1Q12794 435 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 Q6ZS52 159 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM70Q9BUB7 260 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 C2CD4DB7Z1M9 353 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 MKRN2OSH3BPM6 223 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 DLEU1O43261 78 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 NDUFS6O75380 124 aaKnown RBP4.09□□□□□ -1.75
CSMD3-203ENST00000343508 CLEC3BP05452 202 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 CCL3P10147 92 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 COX5BP10606 129 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 ADMP35318 185 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 ATP5IP56385 69 aaPredicted RBP4.09□□□□□ -1.75
CSMD3-203ENST00000343508 KLF3P57682 345 aaPredicted RBP4.09□□□□□ -1.75
CSMD3-203ENST00000343508 PLP1P60201 277 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 RPL31P62899 125 aaKnown RBP4.09□□□□□ -1.75
CSMD3-203ENST00000343508 SLC35B1P78383 322 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF146Q15072 292 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 SSX8Q7RTT4 187 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 TIMP4Q99727 224 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 M0R1B8 84 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 CCL11P51671 97 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 SPOCK3Q9BQ16 436 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 INO80CQ6PI98 192 aaPredicted RBP4.09□□□□□ -1.75
CSMD3-203ENST00000343508 MBD3L1Q8WWY6 194 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF576Q9H609 170 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 ARHGEF17Q96PE2 2063 aaPredicted RBP4.09□□□□□ -1.75
CSMD3-203ENST00000343508 TRGV5A0A0B4J1U4 118 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 A0A1W2PR80 420 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 ARSJQ5FYB0 599 aaPredicted RBP4.09□□□□□ -1.75
CSMD3-203ENST00000343508 CRIPAKQ8N1N5 446 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 MYOZ3Q8TDC0 251 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM74BQ9NUR3 256 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 PROB1E7EW31 1015 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 CBLN1P23435 193 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 CTSSP25774 331 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 SELENOTP62341 195 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 OR2M7Q8NG81 312 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 HEATR5AQ86XA9 2040 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 A0A087WV48 116 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 A0A0J9YW62 118 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM238LA0A1B0GVL6 79 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 A6NJY4 79 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 OR2J3O76001 311 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 AMBPP02760 352 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 HBBP68871 147 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 OR1L1Q8NH94 360 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 ABHD14AQ9BUJ0 271 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 SOX21Q9Y651 276 aaPredicted RBP4.09□□□□□ -1.76
CSMD3-203ENST00000343508 CEACAM18A8MTB9 384 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 SMIM17P0DL12 118 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 ID3Q02535 119 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 HES1Q14469 280 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 GFI1BQ5VTD9 330 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 PLPPR2Q96GM1 343 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 ALKBH7Q9BT30 221 aaPredicted RBP4.09□□□□□ -1.76
CSMD3-203ENST00000343508 AMMECR1Q9Y4X0 333 aaPredicted RBP4.09□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF324BQ6AW86 544 aaPredicted RBP4.09□□□□□ -1.76
CSMD3-203ENST00000343508 MRPL37Q9BZE1 423 aaKnown RBP4.09□□□□□ -1.76
CSMD3-203ENST00000343508 MYO9BQ13459 2157 aa4.09□□□□□ -1.76
CSMD3-203ENST00000343508 PRSS1P07477 247 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 FBXW9Q5XUX1 488 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF525Q8N782 197 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF703Q9H7S9 590 aaPredicted RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 SLC35E4Q6ICL7 350 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 DRAM1Q8N682 238 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ASCL3Q9NQ33 180 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 LIPFP07098 398 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 SNRPCP09234 159 aaKnown RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 RPL13AP40429 203 aaKnown RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 NMUP48645 174 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 UCP2P55851 309 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 TMEM136Q6ZRR5 245 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 RASL11BQ9BPW5 248 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 GNB4Q9HAV0 340 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 SPRY3O43610 288 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 NDUFB3O43676 98 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 KLF7O75840 302 aaPredicted RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 SFTPCP11686 197 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 CRYBB3P26998 211 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 RPL24P83731 157 aaKnown RBP4.08□□□□□ -1.76
CSMD3-203ENST00000343508 LRRC29Q8WV35 223 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ZNF355PQ9NSJ1 428 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 TMPRSS2O15393 492 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 SYNGR3O43761 229 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 TNFSF13O75888 250 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 C8orf88P0DMB2 117 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 GAB4Q2WGN9 574 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 VASH2Q86V25 355 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 LYPD6BQ8NI32 183 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 OR5P3Q8WZ94 311 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 LOXL2Q9Y4K0 774 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 UNC13CQ8NB66 2214 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 TGFBR3LH3BV60 316 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 J3QW42 95 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 PRRX1P54821 245 aa4.08□□□□□ -1.76
CSMD3-203ENST00000343508 ZADH2Q8N4Q0 377 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms