RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ID3Q02535 119 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 GLRX5Q86SX6 157 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 ABHD12Q8N2K0 398 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 WDR61Q9GZS3 305 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 GNB4Q9HAV0 340 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 CISD1Q9NZ45 108 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 NOTCH4Q99466 2003 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 A0A1W2PRD5 423 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 A0A1W2PRF3 423 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 A0A1W2PRM7 423 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 SNURFLB1AK76 121 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 TMEM250H0YL14 139 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 CD3EP07766 207 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 CLDN18P56856 261 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 SPNS3Q6ZMD2 512 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 BARX1Q9HBU1 254 aaPredicted RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 CYTL1Q9NRR1 136 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 OR51B2Q9Y5P1 312 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 MYO7BQ6PIF6 2116 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 COL4A6Q14031 1691 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 PPIAL4EA0A075B759 164 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 FAM157AC9JC47 383 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 PPIAL4DF5H284 164 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 CLEC3BP05452 202 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 ZNF883P0CG24 379 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 PPIAL4FP0DN26 164 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 RPL11P62913 178 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 RNASEKQ6P5S7 137 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 OR4F17Q8NGA8 305 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 TMEM140Q9NV12 185 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 PPIAL4AQ9Y536 164 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 HEATR5AQ86XA9 2040 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 MPDZO75970 2070 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 SERTM2A0A1B0GWG4 89 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 NCBP2LA6PVI3 153 aaKnown RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 K7N7A8 449 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 EGR1P18146 543 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 CDX1P47902 265 aaPredicted RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 PDPNQ86YL7 162 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 FAM117AQ9C073 453 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 IL19Q9UHD0 177 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 USF3Q68DE3 2245 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 LOC102723971A0A1B0GUV8 181 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 PPIHO43447 177 aaKnown RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 FAM216AQ8WUB2 273 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 LEAP2Q969E1 77 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 NDFIP1Q9BT67 221 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 PNRC2Q9NPJ4 139 aaKnown RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 NTN3O00634 580 aaPredicted RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 KBTBD11O94819 623 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 LHX2P50458 406 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 LYZP61626 148 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 GCSAMQ8N6F7 178 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 LRTM2Q8N967 370 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 ZNRF1Q8ND25 227 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 FDCSPQ8NFU4 85 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 PARLQ9H300 379 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 ONECUT1Q9UBC0 465 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 SLC25A10Q9UBX3 287 aaPredicted RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 ARL2-SNX15V9GYD0 113 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 IGKV1-27A0A075B6S5 117 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 TRAV34A0A0B4J273 112 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 C9orf172C9J069 976 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 OR5I1Q13606 314 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 HLA-DRB5Q30154 266 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 MRPS18CQ9Y3D5 142 aaKnown RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 NEURL1O76050 574 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 TRGC1P0CF51 173 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 SLC35E4Q6ICL7 350 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 OR1B1Q8NGR6 318 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 PLPPR1Q8TBJ4 325 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 DCTN5Q9BTE1 182 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 INSIG2Q9Y5U4 225 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 NLRC5Q86WI3 1866 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 KIAA2026Q5HYC2 2103 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 PINLYPA6NC86 204 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 C17orf98A8MV24 154 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 CECR9P0C854 216 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 HNRNPA3P51991 378 aaKnown RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 GAMTQ14353 236 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 VKORC1L1Q8N0U8 176 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 LILRB1Q8NHL6 650 aaPredicted RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 GTF3AQ92664 365 aaKnown RBP6.1□□□□□ -1.43
VCAN-202ENST00000342785 RAB1CQ92928 201 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 AAMDCQ9H7C9 122 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 JPT1Q9UK76 154 aa6.1□□□□□ -1.43
VCAN-202ENST00000342785 OTX1P32242 354 aaPredicted RBP6.09□□□□□ -1.43
VCAN-202ENST00000342785 LRRC75BQ2VPJ9 315 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 VWA1Q6PCB0 445 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 PQLC2Q6ZP29 291 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 OR51M1Q9H341 326 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 APELAP0DMC3 54 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 TMEM183BQ1AE95 376 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 MYLKQ15746 1914 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 SMPD2O60906 423 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 WNT5AP41221 380 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 CD81P60033 236 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 SLC35B1P78383 322 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 C10orf113Q5VZT2 155 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 SSX7Q7RTT5 188 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms