RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 LSM10Q969L4 123 aaKnown RBP13.53□□□□□ -0.24
SCARB1-202ENST00000339570 TMEM147Q9BVK8 224 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 RTL8AQ9BWD3 113 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 FKBP11Q9NYL4 201 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 PAM16Q9Y3D7 125 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 ATMQ13315 3056 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 LRRC30A6NM36 301 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 LINC00473A8K010 186 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 MSMO1Q15800 293 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 C6orf15Q6UXA7 325 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-202ENST00000339570 CNEP1R1Q8N9A8 125 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 MS4A10Q96PG2 267 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 ZNF703Q9H7S9 590 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-202ENST00000339570 HEYLQ9NQ87 328 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-202ENST00000339570 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-202ENST00000339570 B4GALT7Q9UBV7 327 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 MGAQ8IWI9 3026 aa13.53□□□□□ -0.24
SCARB1-202ENST00000339570 GNB1P62873 340 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 MIC13Q5XKP0 118 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 Q6ZS49 121 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 HOXA6P31267 233 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 ARR3P36575 388 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 SSTP61278 116 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 PPP1CBP62140 327 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 ZNF124Q15973 351 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 ZNF497Q6ZNH5 498 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 ABHD12Q8N2K0 398 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 FAM122AQ96E09 287 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 TMEM242Q9NWH2 141 aa13.52□□□□□ -0.24
SCARB1-202ENST00000339570 AQP7O14520 342 aa13.52□□□□□ -0.25
SCARB1-202ENST00000339570 PMS2CLQ68D20 193 aa13.52□□□□□ -0.25
SCARB1-202ENST00000339570 KCNIP4Q6PIL6 250 aa13.52□□□□□ -0.25
SCARB1-202ENST00000339570 SAXO1Q8IYX7 474 aa13.52□□□□□ -0.25
SCARB1-202ENST00000339570 TBX15Q96SF7 602 aa13.52□□□□□ -0.25
SCARB1-202ENST00000339570 ZDHHC11Q9H8X9 412 aa13.52□□□□□ -0.25
SCARB1-202ENST00000339570 PLCE1Q9P212 2302 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 SCO2A0A1W2PP80 73 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 OR5B21A6NL26 309 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 ZNF25P17030 456 aaPredicted RBP13.51□□□□□ -0.25
SCARB1-202ENST00000339570 MPV17P39210 176 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 KIAA1644Q3SXP7 199 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 TMEM14EPQ6UXP3 125 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 Q6ZR03 302 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 Q8NFD4 153 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 SNHG12Q9BXW3 62 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 OR6C3Q9NZP0 311 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 MPC1Q9Y5U8 109 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 RBFOX2O43251 390 aaKnown RBP eCLIP13.51□□□□□ -0.253e-8■■■■■ 62.6
SCARB1-202ENST00000339570 TCL1AP56279 114 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 RAB4BP61018 213 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 NDUFAF3Q9BU61 184 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 MANBALQ9NQG1 85 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 ARL14EPLP0DKL9 152 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 PDLIM3Q53GG5 364 aaPredicted RBP13.51□□□□□ -0.25
SCARB1-202ENST00000339570 OR5R1Q8NH85 324 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 TMEM170AQ8WVE7 144 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 FAM173AQ9BQD7 235 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 FOXJ2Q9P0K8 574 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 GNG12Q9UBI6 72 aa13.51□□□□□ -0.25
SCARB1-202ENST00000339570 B4E171 279 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 TSPAN7P41732 249 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 UBE2NP61088 152 aaKnown RBP13.5□□□□□ -0.25
SCARB1-202ENST00000339570 PRAMEF5Q5TYX0 476 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 HCFC1P51610 2035 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 MDFIC2A0A1B0GVS7 189 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 F2Z2F3 143 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 WISP2O76076 250 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 MYOD1P15172 320 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 ADMP35318 185 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 OR5I1Q13606 314 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 C21orf62-AS1Q17RA5 79 aa13.5□□□□□ -0.25
SCARB1-202ENST00000339570 TRAV3A0A0B4J244 114 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 F6UZH7 168 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 KITLGP21583 273 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 CD82P27701 267 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 SPATA31B1PQ5VZV4 182 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 OR13A1Q8NGR1 328 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 MARCH11A6NNE9 402 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 OR9G9P0C7N8 305 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 MEOX1P50221 254 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 BRWD1-AS2P59051 145 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 ZNF90Q03938 601 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 TBC1D28Q2M2D7 210 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 LINC01551Q86U37 167 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 VN1R17PQ8TDU5 208 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 YLPM1P49750 1951 aaKnown RBP13.49□□□□□ -0.25
SCARB1-202ENST00000339570 IGHV3OR15-7A0A075B7D8 119 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 CATR1Q13166 79 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 RPL39P5Q59GN2 51 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 ZNF645Q8N7E2 425 aa13.49□□□□□ -0.25
SCARB1-202ENST00000339570 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.48□□□□□ -0.25
SCARB1-202ENST00000339570 RRHO14718 337 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 PSG7Q13046 419 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 PPIAL4AQ9Y536 164 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 TGOLN2O43493 480 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 CD1BP29016 333 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 IQCJQ1A5X6 159 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 HLA-DRB5Q30154 266 aa13.48□□□□□ -0.25
SCARB1-202ENST00000339570 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms