RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CNIH1O95406 144 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
LINC01116-202ENST00000339037 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 LINC00205P59089 165 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 TBCEQ15813 527 aaPredicted RBP11.92□□□□□ -0.5
LINC01116-202ENST00000339037 SSX1Q16384 188 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 C2orf76Q3KRA6 126 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 HES5Q5TA89 166 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 PTX4Q96A99 478 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 CNBD2Q96M20 576 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 TUBA4BQ9H853 241 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 V9GY05 133 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 TMEM272A0A1B0GTI8 110 aa11.91□□□□□ -0.5
LINC01116-202ENST00000339037 SHISA3A0PJX4 238 aa11.91□□□□□ -0.5
LINC01116-202ENST00000339037 DENRO43583 198 aaKnown RBP11.91□□□□□ -0.5
LINC01116-202ENST00000339037 SSBP2P81877 361 aaPredicted RBP11.91□□□□□ -0.5
LINC01116-202ENST00000339037 LCN12Q6JVE5 192 aa11.91□□□□□ -0.5
LINC01116-202ENST00000339037 IL34Q6ZMJ4 242 aa11.91□□□□□ -0.5
LINC01116-202ENST00000339037 OR56B1Q8NGI3 324 aa11.91□□□□□ -0.5
LINC01116-202ENST00000339037 CMSS1Q9BQ75 279 aaKnown RBP11.91□□□□□ -0.5
LINC01116-202ENST00000339037 VCX3BQ9H321 246 aa11.91□□□□□ -0.5
LINC01116-202ENST00000339037 ACOT13Q9NPJ3 140 aa11.91□□□□□ -0.5
LINC01116-202ENST00000339037 AADACP22760 399 aa11.9□□□□□ -0.5
LINC01116-202ENST00000339037 OR10A3P58181 314 aa11.9□□□□□ -0.5
LINC01116-202ENST00000339037 PJVKQ0ZLH3 352 aa11.9□□□□□ -0.5
LINC01116-202ENST00000339037 ZNF367Q7RTV3 350 aa11.9□□□□□ -0.5
LINC01116-202ENST00000339037 Q8N402 240 aa11.9□□□□□ -0.5
LINC01116-202ENST00000339037 TMEM68Q96MH6 324 aa11.9□□□□□ -0.5
LINC01116-202ENST00000339037 THAP7Q9BT49 309 aaPredicted RBP11.9□□□□□ -0.5
LINC01116-202ENST00000339037 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.5
LINC01116-202ENST00000339037 KCNK7Q9Y2U2 307 aa11.9□□□□□ -0.5
LINC01116-202ENST00000339037 ALMS1Q8TCU4 4167 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 FAM229AH3BQW9 127 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 M0R1X1 148 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 JTBO76095 146 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 LGALS7P47929 136 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 HSPA13P48723 471 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 DEFA5Q01523 94 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 TATDN3Q17R31 274 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.89□□□□□ -0.51
LINC01116-202ENST00000339037 WDR89Q96FK6 387 aaPredicted RBP11.89□□□□□ -0.51
LINC01116-202ENST00000339037 HARBI1Q96MB7 349 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 TINAGL1Q9GZM7 467 aaPredicted RBP11.89□□□□□ -0.51
LINC01116-202ENST00000339037 SLC35D1Q9NTN3 355 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 NDUFB11Q9NX14 153 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 RDH8Q9NYR8 311 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 SIGLEC8Q9NYZ4 499 aa11.89□□□□□ -0.51
LINC01116-202ENST00000339037 ERICH4A6NGS2 130 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 TRDCB7Z8K6 153 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 OR2A4O95047 310 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 BRI3O95415 125 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 CD3GP09693 182 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 RPEL1Q2QD12 228 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 ZNF343Q6P1L6 599 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 USMG5Q96IX5 58 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 COA4Q9NYJ1 87 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 ADAM30Q9UKF2 790 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 RAB22AQ9UL26 194 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 BLOC1S6Q9UL45 172 aa11.88□□□□□ -0.51
LINC01116-202ENST00000339037 A0A0B4J203 849 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 TRAV1-2A0A0B4J238 106 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 IFITM5A6NNB3 132 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 CSN3P07498 182 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 FCGR3AP08637 254 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 SERPINB10P48595 397 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 PSMD7P51665 324 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 DYRK1AQ13627 763 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 IGSF11Q5DX21 431 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 BVESQ8NE79 360 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 IL17DQ8TAD2 202 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 RAB3CQ96E17 227 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 OR2D2Q9H210 308 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 CEPT1Q9Y6K0 416 aa11.87□□□□□ -0.51
LINC01116-202ENST00000339037 A0A075B6Q4 140 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 IZUMO1RA6ND01 250 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 RAB27BO00194 218 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 MFNGO00587 321 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 PDCD5O14737 125 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 FABP7O15540 132 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 CRYGBP07316 175 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 APELAP0DMC3 54 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 GNB3P16520 340 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 CBX3Q13185 183 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 NR2C2APQ86WQ0 139 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 OR10R2Q8NGX6 335 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 MAFIPQ8WZ33 124 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 SNAPC3Q92966 411 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 PHB2Q99623 299 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 PLEKHA3Q9HB20 300 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 RETNQ9HD89 108 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 PEMTQ9UBM1 199 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 ZNF230Q9UIE0 474 aaPredicted RBP11.86□□□□□ -0.51
LINC01116-202ENST00000339037 RAB26Q9ULW5 256 aa11.86□□□□□ -0.51
LINC01116-202ENST00000339037 TRDV1A0A1B0GX56 115 aa11.85□□□□□ -0.51
LINC01116-202ENST00000339037 SMIM30A4D0T7 59 aa11.85□□□□□ -0.51
LINC01116-202ENST00000339037 BET1O15155 118 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms