RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 COPZ2Q9P299 210 aa11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 VSIG4Q9Y279 399 aa11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 NF1P21359 2839 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 MPPED1O15442 326 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 PEX14O75381 377 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 CRYZL1O95825 349 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 CNTFRP26992 372 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 BTCP35070 178 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 KIR2DS2P43631 304 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 BRWD1-AS2P59051 145 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 MMDQ15546 238 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 SPAG16Q8N0X2 631 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 POC5Q8NA72 575 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 OR8H1Q8NGG4 311 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 OR4C13Q8NGP0 309 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 OR4S2Q8NH73 311 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 RNF5Q99942 180 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 SLC25A21Q9BQT8 299 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 C5orf66Q9H5L9 145 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 C1RLQ9NZP8 487 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 TBC1D24Q9ULP9 559 aa11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
APOBEC3B-202ENST00000335760 SHOXO15266 292 aa11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 NBR2O15453 112 aa11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 RAMP3O60896 148 aa11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 NDUFB6O95139 128 aa11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 F2RP25116 425 aa11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 RPL15P61313 204 aaKnown RBP11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 RBMS2Q15434 407 aaKnown RBP11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 TMEM177Q53S58 311 aa11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 MZT2BQ6NZ67 158 aa11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 ADAD2Q8NCV1 583 aaKnown RBP11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 TAF15Q92804 592 aaKnown RBP eCLIP11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 HARBI1Q96MB7 349 aa11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 TSNAXQ99598 290 aaKnown RBP11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 LIN7CQ9NUP9 197 aaKnown RBP11.22□□□□□ -0.61
APOBEC3B-202ENST00000335760 SH2D7A6NKC9 451 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 M0QZK8 103 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 FGF16O43320 207 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 LGALS7P47929 136 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 RIPPLY3P57055 190 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 ASAH1Q13510 395 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 PSG5Q15238 335 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 C11orf88Q6PI97 169 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 TMED4Q7Z7H5 227 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 C5orf56Q8N8D9 126 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 Q8N9W7 124 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 NPBQ8NG41 125 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 OSR1Q8TAX0 266 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 CD300LFQ8TDQ1 290 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 RASL11BQ9BPW5 248 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 NPFFR1Q9GZQ6 430 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 KIAA1456Q9P272 454 aa11.21□□□□□ -0.61
APOBEC3B-202ENST00000335760 TEX13DA0A0J9YY54 714 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 SRRM4A7MD48 611 aaKnown RBP11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 RBFOX2O43251 390 aaKnown RBP eCLIP11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 AMY1AP04745 511 aa11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 AKR1C4P17516 323 aa11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 BLCAPP62952 87 aa11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 TCTEX1D1Q8N7M0 179 aa11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 NAA60Q9H7X0 242 aa11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
APOBEC3B-202ENST00000335760 FAM240BA0A1B0GVZ2 78 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 CRYM-AS1A6NIL9 109 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 RRHO14718 337 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 SLC25A17O43808 307 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 NDUFA3O95167 84 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 SPDEFO95238 335 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 HPRT1P00492 218 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 IGLV2-23P01705 113 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 VSIG10L2P0DP72 767 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 SLC6A1P30531 599 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 LPAR6P43657 344 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 DEFA1P59665 94 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 DEFA3P59666 94 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 RELBQ01201 579 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 PLGLAQ15195 96 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 KRTAP24-1Q3LI83 254 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 ZNF585BQ52M93 769 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 C9orf152Q5JTZ5 239 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 Q6ZSV7 163 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 FAM71E2Q8N5Q1 922 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 TMEM230Q96A57 120 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 TP53RKQ96S44 253 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 PRSS22Q9GZN4 317 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 FBXL15Q9H469 300 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 FLVCR2Q9UPI3 526 aa11.19□□□□□ -0.62
APOBEC3B-202ENST00000335760 H0Y980 276 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 ARPC1BO15143 372 aaKnown RBP11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 S1PR2O95136 353 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 HRASP01112 189 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 TCRBP04435 133 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 RAG2P55895 527 aa11.18□□□□□ -0.62
APOBEC3B-202ENST00000335760 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms