RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 PCOLCE2Q9UKZ9 415 aa5.39□□□□□ -1.55
CSMD1-201ENST00000335551 TCRBV5S1A1TA0A578 114 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 OR2A4O95047 310 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 KRTCAP3Q53RY4 240 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 CNRIP1Q96F85 164 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-201ENST00000335551 OR2A7Q96R45 310 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 KCNMB2Q9Y691 235 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 TIMM23BQ5SRD1 257 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 DNM1P46Q6ZS02 220 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 PRSS23O95084 383 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 LPAL2Q16609 132 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 GAGE13Q4V321 117 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 DMRTC1Q5HYR2 192 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 RNFT1Q5M7Z0 435 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 RFLNAQ6ZTI6 216 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 LILRA3Q8N6C8 439 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-201ENST00000335551 PLPPR2Q96GM1 343 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 C16orf92Q96LL3 132 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 OR2H1Q9GZK4 316 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 COL22A1Q8NFW1 1626 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-201ENST00000335551 GDF9O60383 454 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 PAX2Q02962 417 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 DCAF12L2Q5VW00 463 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 PGLYRP3Q96LB9 341 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 ZNF714Q96N38 554 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 FRRS1LQ9P0K9 344 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 ECSCRQ19T08 205 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 ISXQ2M1V0 245 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 ASB5Q8WWX0 329 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 MS4A6AQ9H2W1 248 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 HIVEP3Q5T1R4 2406 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 A0A1B0GTH9 108 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 A8MWV9 139 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 PXNP49023 591 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-201ENST00000335551 TRBV7-9A0A0J9YWB2 115 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 CD1AP06126 327 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 ZNF32P17041 273 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 C1orf174Q8IYL3 243 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 LINC00615Q96LM1 132 aaPredicted RBP5.38□□□□□ -1.55
CSMD1-201ENST00000335551 PRSS27Q9BQR3 290 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 OVOL2Q9BRP0 275 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 PDFQ9HBH1 243 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 OBSL1O75147 1896 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 H3BUT2 72 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 ESDP10768 282 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 PSG6Q00889 435 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 CENPWQ5EE01 88 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 TMEM170BQ5T4T1 132 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 UBR3Q6ZT12 1888 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 TRAV9-2A0A087WT02 112 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 LILRA5A6NI73 299 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 RPL36A-HNRNPH2H7BZ11 118 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 TMPRSS2O15393 492 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 CNTFRP26992 372 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 LINC01559Q495D7 138 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 MESTQ5EB52 335 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 CCL28Q9NRJ3 127 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 SPANXCQ9NY87 97 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 LINC00587B1AMM8 73 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 TMEM108Q6UXF1 575 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 LRTM2Q8N967 370 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 G6PC2Q9NQR9 355 aa5.38□□□□□ -1.55
CSMD1-201ENST00000335551 C3orf80F5H4A9 247 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 FSTP19883 344 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 COX7A1P24310 79 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 SRSF6Q13247 344 aaKnown RBP5.37□□□□□ -1.55
CSMD1-201ENST00000335551 TNFRSF12AQ9NP84 129 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 NYNRINQ9P2P1 1898 aaKnown RBP5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ASPDHA6ND91 283 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 LGALS1P09382 135 aaKnown RBP5.37□□□□□ -1.55
CSMD1-201ENST00000335551 RND3P61587 244 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ZNF56Q15929 161 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSMD1-201ENST00000335551 SIT1Q9Y3P8 196 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 FRMPD3Q5JV73 1810 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 A8MXK9 166 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 NKX2-2O95096 273 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 PLNP26678 52 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 TAF15Q92804 592 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ISG15P05161 165 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ATXN8Q156A1 80 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 OR5AN1Q8NGI8 311 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 KLK15Q9H2R5 256 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 KLK13Q9UKR3 277 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 SBF1O95248 1867 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 SOCS1O15524 211 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ASAH2BP0C7U1 165 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 DNASE2BQ8WZ79 361 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 MYO9AB2RTY4 2548 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 A0A1W2PRS3 328 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 GGTLC3B5MD39 225 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 VSIG10L2P0DP72 767 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 CX3CL1P78423 397 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 PLXNB3Q9ULL4 1909 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 TRGV5A0A0B4J1U4 118 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 A0A1W2PR80 420 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ODAMA1E959 279 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 FAM157AC9JC47 383 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 NXPH1P58417 271 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms