RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 VPS25Q9BRG1 176 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 CISD1Q9NZ45 108 aaKnown RBP11.7□□□□□ -0.54
SF1-202ENST00000334944 ERRFI1Q9UJM3 462 aaPredicted RBP11.7□□□□□ -0.54
SF1-202ENST00000334944 RNF114Q9Y508 228 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 TRAPPC1Q9Y5R8 145 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 ZNF16P17020 682 aaPredicted RBP11.69□□□□□ -0.54
SF1-202ENST00000334944 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 MRPL30Q8TCC3 161 aaKnown RBP11.69□□□□□ -0.54
SF1-202ENST00000334944 PYGO2Q9BRQ0 406 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 OR51I2Q9H344 312 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 TMEM106BQ9NUM4 274 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 USF3Q68DE3 2245 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 NKX6-3A6NJ46 265 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 TRDCB7Z8K6 153 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 HINT1P49773 126 aaPredicted RBP11.69□□□□□ -0.54
SF1-202ENST00000334944 GNG3P63215 75 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 TPTE2P1Q5T6R2 138 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 GNPNAT1Q96EK6 184 aaPredicted RBP11.69□□□□□ -0.54
SF1-202ENST00000334944 CTDSP1Q9GZU7 261 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 PLK3Q9H4B4 646 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 DLL3Q9NYJ7 618 aa11.69□□□□□ -0.54
SF1-202ENST00000334944 ZNF292O60281 2723 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 F2Z2F3 143 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 SS18L1O75177 396 aaPredicted RBP11.68□□□□□ -0.54
SF1-202ENST00000334944 HRASP01112 189 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 DEFA4P12838 97 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 IGHV1-2P23083 117 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 ZNF826PQ6ZT77 177 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 LYRM2Q9NU23 88 aaPredicted RBP11.68□□□□□ -0.54
SF1-202ENST00000334944 NAT8Q9UHE5 227 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 LOC105371242A0A075B767 164 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 A0A0G2JRQ6 117 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 DEGS1O15121 323 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 IL3RAP26951 378 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 CDKN1BP46527 198 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 TAS2R30P59541 319 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 SELENOTP62341 195 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 SELENOHQ8IZQ5 122 aaKnown RBP11.68□□□□□ -0.54
SF1-202ENST00000334944 OR8G5Q8NG78 346 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 CMTM2Q8TAZ6 248 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 ATP5SQ99766 215 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 PPP1R3CQ9UQK1 317 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 PCNX1Q96RV3 2341 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 ADGRG4Q8IZF6 3080 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 CDS2O95674 445 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 PCSK4Q6UW60 755 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 RBM7Q9Y580 266 aaKnown RBP11.68□□□□□ -0.54
SF1-202ENST00000334944 ATP23Q9Y6H3 246 aa11.68□□□□□ -0.54
SF1-202ENST00000334944 PGPEP1LA6NFU8 196 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 ZNF737O75373 536 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 KRTDAPP60985 99 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 ACOT6Q3I5F7 207 aaPredicted RBP11.67□□□□□ -0.54
SF1-202ENST00000334944 SAXO1Q8IYX7 474 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 ST6GALNAC3Q8NDV1 305 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 Q8NFD4 153 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 SLC25A40Q8TBP6 338 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 WNT9BO14905 357 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 UBE2NP61088 152 aaKnown RBP11.67□□□□□ -0.54
SF1-202ENST00000334944 TMEM183BQ1AE95 376 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 VWA1Q6PCB0 445 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 LRTM2Q8N967 370 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 SCCPDHQ8NBX0 429 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 C20orf144Q9BQM9 153 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 PARLQ9H300 379 aa11.67□□□□□ -0.54
SF1-202ENST00000334944 MPV17P39210 176 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 PPP1CBP62140 327 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 TBC1D28Q2M2D7 210 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 ATOH7Q8N100 152 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 LOXL4Q96JB6 756 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 C11orf1Q9H5F2 150 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 KCNS2Q9ULS6 477 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 PGLYRP1O75594 196 aaPredicted RBP11.66□□□□□ -0.54
SF1-202ENST00000334944 PSG2P11465 335 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 FOXF2Q12947 444 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 H1FOOQ8IZA3 346 aaPredicted RBP11.66□□□□□ -0.54
SF1-202ENST00000334944 OR4F5Q8NH21 305 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 OR4F4Q96R69 305 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 TXN2Q99757 166 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 ACACAQ13085 2346 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 KIR2DS1A0A191URI9 304 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 C1QTNF9BB2RNN3 333 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 SMPD2O60906 423 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 OR2H2O95918 312 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 IAPPP10997 89 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 ADMP35318 185 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 KIR2DS4P43632 304 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 KIR2DS1Q14954 304 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 Q6ZN92 141 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 TGIF2LYQ8IUE0 185 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 TMEM178AQ8NBL3 297 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 LHX4Q969G2 390 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 TRAPPC2LQ9UL33 140 aa11.66□□□□□ -0.54
SF1-202ENST00000334944 SH2D1BO14796 132 aa11.65□□□□□ -0.54
SF1-202ENST00000334944 WDR1O75083 606 aa11.65□□□□□ -0.54
SF1-202ENST00000334944 IFNA5P01569 189 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms