RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TRBV24-1A0A075B6N3 115 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 A0A1W2PP11 408 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 PTGDSP41222 190 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 P2RY4P51582 365 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 COX14Q96I36 57 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 RTN4RQ9BZR6 473 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 IGHV3-9P01782 118 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 SNRPD3P62318 126 aaKnown RBP4.77□□□□□ -1.65
PTPRB-202ENST00000334414 MEIG1Q5JSS6 88 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 SHISA5Q8N114 240 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 RAX2Q96IS3 184 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 PGLYRP4Q96LB8 373 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 SRP19P09132 144 aaKnown RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 DCAF10Q5QP82 559 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SPATA46Q5T0L3 261 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SOSTQ9BQB4 213 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 F11RQ9Y624 299 aaKnown RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 MGST3O14880 152 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 PEX11BO96011 259 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 RRN3P1Q2M238 152 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SPRED2Q7Z698 418 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 BATF2Q8N1L9 274 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF441Q8N8Z8 693 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 KLHDC2Q9Y2U9 406 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 DPM2O94777 84 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 COX5BP10606 129 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 CX3CL1P78423 397 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SRSF1Q07955 248 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 FOXL1Q12952 345 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 WFDC5Q8TCV5 224 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 DLX4Q92988 240 aaPredicted RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 TRMT61AQ96FX7 289 aaKnown RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 LRRC61Q9BV99 259 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 MS4A5Q9H3V2 200 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 OSTCQ9NRP0 149 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 CLEC1BQ9P126 229 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 CCL27Q9Y4X3 112 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 A0A0G2JMM0 328 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 A0A1W2PPB8 328 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 KIR3DP1A8MWS1 328 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 DXOO77932 396 aaKnown RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 IGHV4-34P06331 123 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 Q96M66 194 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 PRDM14Q9GZV8 571 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 MRPL27Q9P0M9 148 aaKnown RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 NDUFS6O75380 124 aaKnown RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 CCL11P51671 97 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 KLHDC9Q8NEP7 349 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SMIM14Q96QK8 99 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 ZFC3H1O60293 1989 aaKnown RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 IGHV3-15A0A0B4J1V0 119 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SYNGR3O43761 229 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 CD160O95971 181 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 RUNX1Q01196 453 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 UNQ9370/PRO34162Q6UXP9 181 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 A0A1B0GTI1 187 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 MED19A0JLT2 244 aaPredicted RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 C21orf140B9A014 251 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 NPFFO15130 113 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 C1QAP02745 245 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 C19orf48Q6RUI8 117 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 RNASEH2CQ8TDP1 164 aaKnown RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF479Q96JC4 524 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 C16orf92Q96LL3 132 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 HS3ST3B1Q9Y662 390 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 A0A0G2JLM5 398 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 GDF9O60383 454 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 PGLYRP1O75594 196 aaPredicted RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 GCHFRP30047 84 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SIGLEC14Q08ET2 396 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 NR2C2APQ86WQ0 139 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 ARPC1AQ92747 370 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 AKIRIN1Q9H9L7 192 aaPredicted RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 TRBV23-1A0A0A0MS06 115 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 C9JCJ5 164 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SPRY3O43610 288 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 UCP2P55851 309 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 RIPPLY3P57055 190 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 PIGYQ3MUY2 71 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 ACSF3Q4G176 576 aaPredicted RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 LAMTOR1Q6IAA8 161 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 LIMS2Q7Z4I7 341 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 C12orf76Q8N812 135 aaPredicted RBP4.76□□□□□ -1.65
PTPRB-202ENST00000334414 TRGV5A0A0B4J1U4 118 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 TM4SF20Q53R12 229 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 HEPN1Q6WQI6 88 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF683Q8IZ20 524 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 HIST1H2BLQ99880 126 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 SARGQ9BW04 601 aa4.76□□□□□ -1.65
PTPRB-202ENST00000334414 FAM106CPP0CH98 169 aa4.75□□□□□ -1.65
PTPRB-202ENST00000334414 PAX2Q02962 417 aa4.75□□□□□ -1.65
PTPRB-202ENST00000334414 SRSF7Q16629 238 aaKnown RBP eCLIP4.75□□□□□ -1.65
PTPRB-202ENST00000334414 SLC25A48Q6ZT89 311 aaKnown RBP4.75□□□□□ -1.65
PTPRB-202ENST00000334414 RNF186Q9NXI6 227 aa4.75□□□□□ -1.65
PTPRB-202ENST00000334414 ARID2Q68CP9 1835 aa4.75□□□□□ -1.65
PTPRB-202ENST00000334414 IGKCP01834 107 aa4.75□□□□□ -1.65
PTPRB-202ENST00000334414 PRSS2P07478 247 aa4.75□□□□□ -1.65
PTPRB-202ENST00000334414 INAFM2P0DMQ5 153 aa4.75□□□□□ -1.65
PTPRB-202ENST00000334414 CNTFRP26992 372 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms