RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 DYNLRB1Q9NP97 96 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 KCNJ16Q9NPI9 418 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 GFOD1Q9NXC2 390 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 DCAF16Q9NXF7 216 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 PSENENQ9NZ42 101 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 COQ3Q9NZJ6 369 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 CACFD1Q9UGQ2 172 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 NDRG3Q9UGV2 375 aa7.2□□□□□ -1.26
LSAMP-201ENST00000333617 STRAPQ9Y3F4 350 aaKnown RBP7.2□□□□□ -1.26
LSAMP-201ENST00000333617 RELNP78509 3460 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-201ENST00000333617 ZNF729A6NN14 1252 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-201ENST00000333617 TRIM77I1YAP6 450 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 M0R1X1 148 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 ITGB1BP1O14713 200 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 IGHV3-7P01780 117 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 ATP6V0CP27449 155 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 APOBEC3AP31941 199 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-201ENST00000333617 CAMLGP49069 296 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 ZNF134P52741 427 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 BRWD1-AS2P59051 145 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 UBE2KP61086 200 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 HBG1P69891 147 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 HBG2P69892 147 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 AKR1C1Q04828 323 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 ZNF616Q08AN1 781 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 TMEM30BQ3MIR4 351 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 MIDNQ504T8 468 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 TMEM182Q6ZP80 229 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-201ENST00000333617 OR2G3Q8NGZ4 309 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 CORO2AQ92828 525 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 NEUROG1Q92886 237 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 GNPNAT1Q96EK6 184 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-201ENST00000333617 TSNAXQ99598 290 aaKnown RBP7.19□□□□□ -1.26
LSAMP-201ENST00000333617 ABHD14AQ9BUJ0 271 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 RBKSQ9H477 322 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 TREM1Q9NP99 234 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.19□□□□□ -1.26
LSAMP-201ENST00000333617 HSPB7Q9UBY9 170 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 TMA7Q9Y2S6 64 aaKnown RBP7.19□□□□□ -1.26
LSAMP-201ENST00000333617 PKD1L2Q7Z442 2459 aa7.19□□□□□ -1.26
LSAMP-201ENST00000333617 MALRD1Q5VYJ5 2156 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 PPIAL4EA0A075B759 164 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 hADV38S2A0JD32 116 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 MARCH11A6NNE9 402 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 B9A039 149 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 PPIAL4DF5H284 164 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 TMEM178BH3BS89 294 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 PROP1O75360 226 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 TSPAN15O95858 294 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 IFNA5P01569 189 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 METTL15P1P0C7V9 234 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 C1QTNF9P0C862 333 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 PPIAL4FP0DN26 164 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 NDUFB7P17568 137 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 M6PRP20645 277 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 NFYBP25208 207 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 KIR2DS2P43631 304 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 ID4P47928 161 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 LINC00205P59089 165 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 SRSF3P84103 164 aaKnown RBP7.18□□□□□ -1.26
LSAMP-201ENST00000333617 DEFA5Q01523 94 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 TNFRSF9Q07011 255 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 RPL39P5Q59GN2 51 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 NCR3LG1Q68D85 454 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 TCF23Q7RTU1 214 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 LYPD6BQ8NI32 183 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 SUN5Q8TC36 379 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 LEAP2Q969E1 77 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 LRRC46Q96FV0 321 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 IFI27L2Q9H2X8 130 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 MS4A5Q9H3V2 200 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 LINC00574Q9H8X3 128 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 C19orf12Q9NSK7 152 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 IDI2-AS1Q9NZ38 188 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 SLC25A10Q9UBX3 287 aaPredicted RBP7.18□□□□□ -1.26
LSAMP-201ENST00000333617 GAB2Q9UQC2 676 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 PRELID3BQ9Y3B1 194 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 PPIAL4AQ9Y536 164 aa7.18□□□□□ -1.26
LSAMP-201ENST00000333617 UMAD1C9J7I0 102 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 F8W036 122 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 AGPAT2O15120 278 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 SLC31A2O15432 143 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 FCGR3BO75015 233 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 C1QL1O75973 258 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 HPRT1P00492 218 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 EFNB3Q15768 340 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 CT45A1Q5HYN5 189 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 SPANXN5Q5MJ07 72 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 SLC25A24Q6NUK1 477 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 COMMD1Q8N668 190 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.17□□□□□ -1.26
LSAMP-201ENST00000333617 CT45A3Q8NHU0 189 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 LINC01560Q8TB33 94 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 FAM213BQ8TBF2 198 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 CCL17Q92583 94 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 R3HDM4Q96D70 268 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 S1PR3Q99500 378 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 MS4A7Q9GZW8 240 aaPredicted RBP7.17□□□□□ -1.26
LSAMP-201ENST00000333617 TMEM231Q9H6L2 316 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms