RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 FAM216AQ8WUB2 273 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 GGACTQ9BVM4 153 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 ELOVL5Q9NYP7 299 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 CLN8Q9UBY8 286 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 SH3BGRL2Q9UJC5 107 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 SPTBN2O15020 2390 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 MAP1BP46821 2468 aaKnown RBP14.43□□□□□ -0.1
DDX28-201ENST00000332395 MARCH11A6NNE9 402 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 CYB5R3P00387 301 aaPredicted RBP14.43□□□□□ -0.1
DDX28-201ENST00000332395 TNFSF4P23510 183 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 RAB2AP61019 212 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 SLC38A11Q08AI6 406 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 NCMAPQ5T1S8 102 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 YPEL4Q96NS1 127 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 OR4C12Q96R67 309 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 PSMG3Q9BT73 122 aaPredicted RBP14.43□□□□□ -0.1
DDX28-201ENST00000332395 CALYQ9NYX4 217 aa14.43□□□□□ -0.1
DDX28-201ENST00000332395 PLCE1Q9P212 2302 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 OR13C7P0DN81 318 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 TBR1Q16650 682 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 OR8G2PQ6IF36 304 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 WFDC8Q8IUA0 241 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 SDSLQ96GA7 329 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 SCNM1Q9BWG6 230 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 WDR61Q9GZS3 305 aaKnown RBP14.42□□□□□ -0.1
DDX28-201ENST00000332395 DSCAMO60469 2012 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 ZGRF1Q86YA3 2104 aa14.42□□□□□ -0.1
DDX28-201ENST00000332395 NDUFS6O75380 124 aaKnown RBP14.41□□□□□ -0.1
DDX28-201ENST00000332395 RBMXL2O75526 392 aaKnown RBP14.41□□□□□ -0.1
DDX28-201ENST00000332395 IGHV3-7P01780 117 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 HBE1P02100 147 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 CGB3P0DN86 165 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 CGB7P0DN87 165 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 HOXA5P20719 270 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 ZNF134P52741 427 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 STUMQ69YW2 141 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 DUX4L9Q6RFH8 374 aaPredicted RBP14.41□□□□□ -0.1
DDX28-201ENST00000332395 DTD1Q8TEA8 209 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 ZDHHC16Q969W1 377 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 PARD6GQ9BYG4 376 aaPredicted RBP14.41□□□□□ -0.1
DDX28-201ENST00000332395 NCOR1P1Q9H4R4 102 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 RPRMQ9NS64 109 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 UBE2L5PA0A1B0GUS4 154 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 ZG16O60844 167 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 FCGR3BO75015 233 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 HAGHQ16775 308 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 Q8TCH9 128 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 R3HDM4Q96D70 268 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 RBMXL1Q96E39 390 aaKnown RBP14.41□□□□□ -0.1
DDX28-201ENST00000332395 IFI27L2Q9H2X8 130 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 ICE1Q9Y2F5 2266 aa14.41□□□□□ -0.1
DDX28-201ENST00000332395 M0R1X1 148 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 C17orf58Q2M2W7 97 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 RPL39P5Q59GN2 51 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 HEPN1Q6WQI6 88 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 DEFB108BQ8NET1 73 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 VSIRQ9H7M9 311 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 TRAV1-1A0A0B4J248 108 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 SERF2P84101 59 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 SOHLH1Q5JUK2 328 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 TAF15Q92804 592 aaKnown RBP eCLIP14.4□□□□□ -0.1
DDX28-201ENST00000332395 CIB3Q96Q77 187 aaPredicted RBP14.4□□□□□ -0.1
DDX28-201ENST00000332395 ZNF835Q9Y2P0 537 aa14.4□□□□□ -0.1
DDX28-201ENST00000332395 DPRXA6NFQ7 191 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 K7ENP7 123 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 HPRT1P00492 218 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 CLDND2Q8NHS1 167 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 SNRNP40Q96DI7 357 aaKnown RBP14.39□□□□□ -0.11
DDX28-201ENST00000332395 GAFA1Q96PS6 74 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 FAM234AQ9H0X4 552 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 RAB9BQ9NP90 201 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 JKAMPQ9P055 326 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 RAI1Q7Z5J4 1906 aaPredicted RBP14.39□□□□□ -0.11
DDX28-201ENST00000332395 KBTBD11-OT1A0A1B0GTJ5 212 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 SLC31A2O15432 143 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 OR2C1O95371 312 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 THBDP07204 575 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 CD55P08174 381 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 CDX1P47902 265 aaPredicted RBP14.39□□□□□ -0.11
DDX28-201ENST00000332395 BSPH1Q075Z2 132 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 ICAM4Q14773 271 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 PRR30Q53SZ7 412 aaPredicted RBP14.39□□□□□ -0.11
DDX28-201ENST00000332395 SPINK9Q5DT21 86 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 ZNF506Q5JVG8 444 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 UTF1Q5T230 341 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 TGIF2LYQ8IUE0 185 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 PIEZO2Q9H5I5 2752 aa14.39□□□□□ -0.11
DDX28-201ENST00000332395 DSCAML1Q8TD84 2053 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 TRGV10A0A0A0MS01 117 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 PMS2P5A8MQ11 134 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 CEBPZOSA8MTT3 80 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 YIF1AO95070 293 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 SCAF4O95104 1147 aaKnown RBP14.38□□□□□ -0.11
DDX28-201ENST00000332395 GYPAP02724 150 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 OR9G9P0C7N8 305 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 IRF2P14316 349 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 KIAA0141Q14154 515 aaPredicted RBP14.38□□□□□ -0.11
DDX28-201ENST00000332395 ADIPOQQ15848 244 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 PYY3Q5JQD4 70 aa14.38□□□□□ -0.11
DDX28-201ENST00000332395 LEAP2Q969E1 77 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms