RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NPPCP23582 126 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 HOXB3P14651 431 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-201ENST00000331920 ATP5J2P56134 94 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 SRSF6Q13247 344 aaKnown RBP14.2□□□□□ -0.14
PTCH1-201ENST00000331920 ZNF562Q6V9R5 426 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 UBE2DNLQ8IWF7 75 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 EEF1AKMT3Q96AZ1 226 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 SYNGR3O43761 229 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 PAPPA-AS1Q5QFB9 102 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 GFI1BQ5VTD9 330 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 WDR82Q6UXN9 313 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 LINC00596Q86U02 117 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 OR4D11Q8NGI4 311 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 SLC25A15Q9Y619 301 aa14.2□□□□□ -0.14
PTCH1-201ENST00000331920 IGHV3-64A0A075B6Q5 118 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 ZNF250P15622 560 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 CST9LQ9H4G1 147 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 A0A1B0GTL3 188 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 OR51M1Q9H341 326 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 TOPAZ1Q8N9V7 1692 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 CHD3Q12873 2000 aaKnown RBP14.19□□□□□ -0.14
PTCH1-201ENST00000331920 MZB1Q8WU39 189 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 RPL32P62910 135 aaKnown RBP14.19□□□□□ -0.14
PTCH1-201ENST00000331920 DEGS2Q6QHC5 323 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 LINC00615Q96LM1 132 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-201ENST00000331920 OR5AC2Q9NZP5 309 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 MEF2BQ02080 365 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-201ENST00000331920 ZNF415Q09FC8 603 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 NACAE9PAV3 2078 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 DDTP30046 118 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 DNAJC4Q9NNZ3 241 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 CRPP02741 224 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 NRIP2Q9BQI9 281 aa14.19□□□□□ -0.14
PTCH1-201ENST00000331920 TRAV8-4A0A0B4J246 113 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 TMEM42Q69YG0 159 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 SLC25A2Q9BXI2 301 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 CDC42EP2O14613 210 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 C1QL3Q5VWW1 255 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 TEX29Q8N6K0 151 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 RASL10BQ96S79 203 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 TIAM2Q8IVF5 1701 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 MT-ND6P03923 174 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 GLMPQ8WWB7 406 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 CLDN16Q9Y5I7 305 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 NKX2-2O95096 273 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 ZNF430Q9H8G1 570 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-201ENST00000331920 DSPPQ9NZW4 1301 aa14.18□□□□□ -0.14
PTCH1-201ENST00000331920 C7orf66A4D0T2 115 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 AGAP20933 346 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 CCL3P10147 92 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 OR10J3Q5JRS4 329 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 S100A7L2Q5SY68 101 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 SUMO4Q6EEV6 95 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 SSC4DQ8WTU2 575 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 KMT2EQ8IZD2 1858 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 GLULP15104 373 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 ZBTB34Q8NCN2 500 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 CALYQ9NYX4 217 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 CISD1Q9NZ45 108 aaKnown RBP14.17□□□□□ -0.14
PTCH1-201ENST00000331920 KLF4O43474 513 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 FOXA3P55318 350 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-201ENST00000331920 QTRT1Q9BXR0 403 aaKnown RBP14.17□□□□□ -0.14
PTCH1-201ENST00000331920 MEGF9Q9H1U4 602 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 IGHV1OR21-1A0A087WYE8 117 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 C1QL1O75973 258 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 SCTP09683 121 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 TMEM155Q4W5P6 130 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 PLA2G2FQ9BZM2 168 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 FNDC4Q9H6D8 234 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-201ENST00000331920 SERGEFQ9UGK8 458 aa14.17□□□□□ -0.14
PTCH1-201ENST00000331920 MYO5AQ9Y4I1 1855 aaKnown RBP14.17□□□□□ -0.14
PTCH1-201ENST00000331920 SFTPCP11686 197 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 MPDZO75970 2070 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 J3QT63 122 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 MOSP00540 346 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 TSPAN7P41732 249 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 NIT1Q86X76 327 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 FGF9P31371 208 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-201ENST00000331920 C1orf185Q5T7R7 199 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 MRAPQ8TCY5 172 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 PEX7O00628 323 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 LINC00305Q7Z4B0 112 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 GATD1Q8NB37 220 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 KLK13Q9UKR3 277 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 TRAV24A0A0B4J272 114 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 LIPT2A6NK58 231 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 ZFP36L2P47974 494 aaKnown RBP14.16□□□□□ -0.14
PTCH1-201ENST00000331920 INTS1Q8N201 2190 aaKnown RBP14.16□□□□□ -0.14
PTCH1-201ENST00000331920 H7C1H1 209 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 C9orf62Q8N4C0 152 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 LRRC37A3O60309 1634 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 TRGV3P03979 118 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 CCL4P13236 92 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 RAG2P55895 527 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 TFF2Q03403 129 aa14.16□□□□□ -0.14
PTCH1-201ENST00000331920 ATP5LO75964 103 aa14.15□□□□□ -0.14
PTCH1-201ENST00000331920 PRSS53Q2L4Q9 553 aa14.15□□□□□ -0.14
PTCH1-201ENST00000331920 SHISA5Q8N114 240 aa14.15□□□□□ -0.14
PTCH1-201ENST00000331920 SH3BGRL3Q9H299 93 aa14.15□□□□□ -0.14
PTCH1-201ENST00000331920 DPRXA6NFQ7 191 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms