RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 MRPS16Q9Y3D3 137 aaKnown RBP15.34■□□□□ 0.05
PKP3-201ENST00000331563 RIF1Q5UIP0 2472 aaKnown RBP15.34■□□□□ 0.05
PKP3-201ENST00000331563 MLNRO43193 412 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 SERPINA7P05543 415 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 SLC25A6P12236 298 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 APOBEC3AP31941 199 aaPredicted RBP15.33■□□□□ 0.04
PKP3-201ENST00000331563 CDC34P49427 236 aaPredicted RBP15.33■□□□□ 0.04
PKP3-201ENST00000331563 MRPL14Q6P1L8 145 aaKnown RBP15.33■□□□□ 0.04
PKP3-201ENST00000331563 DEFB126Q9BYW3 111 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 DIDO1Q9BTC0 2240 aaKnown RBP15.33■□□□□ 0.04
PKP3-201ENST00000331563 COL5A1P20908 1838 aaPredicted RBP15.33■□□□□ 0.04
PKP3-201ENST00000331563 ZNF407Q9C0G0 2248 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 F2Z2F3 143 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 CTXN2P0C2S0 81 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 CD99P14209 185 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 TSPOP30536 169 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 THBS3P49746 956 aa15.33■□□□□ 0.04
PKP3-201ENST00000331563 OR5B21A6NL26 309 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 WNT2P09544 360 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 PSG1P11464 419 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 BCL3P20749 454 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 RNPS1Q15287 305 aaKnown RBP15.32■□□□□ 0.04
PKP3-201ENST00000331563 Q8N976 141 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 ZNF114Q8NC26 417 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 ABHD3Q8WU67 409 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 FBXL7Q9UJT9 491 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 R4GN57 208 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 EXPH5Q8NEV8 1989 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 PCNX2A6NKB5 2137 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 PIGBOS1A0A0B4J2F0 54 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 A0A1W2PRS3 328 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 M0R296 226 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 FCN1O00602 326 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 NTN3O00634 580 aaPredicted RBP15.32■□□□□ 0.04
PKP3-201ENST00000331563 ATP5G3P48201 142 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 GNB1P62873 340 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 C10orf128Q5T292 105 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 SLC23A3Q6PIS1 610 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 KCNS2Q9ULS6 477 aa15.32■□□□□ 0.04
PKP3-201ENST00000331563 ZFAND5O76080 213 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 LHX2P50458 406 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 CLDN18P56856 261 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 KLHDC1Q8N7A1 406 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 OR1F12Q8NHA8 337 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 UCN2Q96RP3 112 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 SF3B5Q9BWJ5 86 aaKnown RBP15.31■□□□□ 0.04
PKP3-201ENST00000331563 TIMM9Q9Y5J7 89 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 ATP23Q9Y6H3 246 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 KLF7O75840 302 aaPredicted RBP15.31■□□□□ 0.04
PKP3-201ENST00000331563 YPEL3P61236 119 aaPredicted RBP15.31■□□□□ 0.04
PKP3-201ENST00000331563 SLC25A53Q5H9E4 307 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 IL36RNQ9UBH0 155 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 OR2W1Q9Y3N9 320 aa15.31■□□□□ 0.04
PKP3-201ENST00000331563 IGHV1-69-2A0A0G2JMI3 117 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 FAM166BA8MTA8 275 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 RBFOX2O43251 390 aaKnown RBP eCLIP15.3■□□□□ 0.049e-7■■■■□ 19.5
PKP3-201ENST00000331563 IGKV1-39P01597 117 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 IGKV1-5P01602 117 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 IGKV1D-39P04432 117 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 RNF114Q9Y508 228 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 SH2D1BO14796 132 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 PDE6DO43924 150 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 CRYGSP22914 178 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 RIPPLY3P57055 190 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 PEAR1Q5VY43 1037 aaPredicted RBP15.3■□□□□ 0.04
PKP3-201ENST00000331563 HS3ST6Q96QI5 342 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 TMEM204Q9BSN7 226 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 PMCHP20382 165 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 AMTP48728 403 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 TFF3Q07654 80 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 DAZAP2Q15038 168 aaPredicted RBP15.3■□□□□ 0.04
PKP3-201ENST00000331563 ZNF596Q8TC21 504 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 LSM10Q969L4 123 aaKnown RBP15.3■□□□□ 0.04
PKP3-201ENST00000331563 CDC42EP3Q9UKI2 254 aa15.3■□□□□ 0.04
PKP3-201ENST00000331563 SPENQ96T58 3664 aaKnown RBP15.3■□□□□ 0.04
PKP3-201ENST00000331563 PTGDSP41222 190 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 IER3P46695 156 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 ARF6P62330 175 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 IL11RAQ14626 422 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 PCOLCEQ15113 449 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 TMEM42Q69YG0 159 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 Q6ZS49 121 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 OR2M3Q8NG83 312 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 OR10G8Q8NGN5 311 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 TMEM54Q969K7 222 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 MEGF9Q9H1U4 602 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 J3QW42 95 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 SYNGR3O43761 229 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 SP9P0CG40 484 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 CLDN15P56746 228 aa15.29■□□□□ 0.04
PKP3-201ENST00000331563 TBL2Q9Y4P3 447 aaKnown RBP15.29■□□□□ 0.04
PKP3-201ENST00000331563 SPTBN2O15020 2390 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 B4GALT1P15291 398 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 ZNF32P17041 273 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 FAM27BQ5VT28 67 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 TCTEX1D1Q8N7M0 179 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 TMEM147Q9BVK8 224 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 WNT10AQ9GZT5 417 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 SNURFLB1AK76 121 aa15.28■□□□□ 0.04
PKP3-201ENST00000331563 Q5PR19 223 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms