RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PGAM2P15259 253 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 BTCP35070 178 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 CATR1Q13166 79 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 MMDQ15546 238 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 PHLDA2Q53GA4 152 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 Q8N2B8 174 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 NPBQ8NG41 125 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 OR4C13Q8NGP0 309 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 FLYWCH2Q96CP2 140 aaKnown RBP12.76□□□□□ -0.37
LRRC28-202ENST00000331450 C7orf50Q9BRJ6 194 aaKnown RBP12.76□□□□□ -0.37
LRRC28-202ENST00000331450 ZNF702PQ9H963 129 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 GPR132Q9UNW8 380 aa12.76□□□□□ -0.37
LRRC28-202ENST00000331450 NAP1L6A6NFF2 107 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 NBR2O15453 112 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 RBFOX2O43251 390 aaKnown RBP eCLIP12.75□□□□□ -0.37
LRRC28-202ENST00000331450 FCGR3BO75015 233 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 UPK1BO75841 260 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 SPDEFO95238 335 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 CRYZL1O95825 349 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 IGLV2-23P01705 113 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 CRYBA1P05813 215 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 PI3P19957 117 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 KIR2DS2P43631 304 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 BLCAPP62952 87 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 KRTAP21-3Q3LHN1 58 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 OR2B11Q5JQS5 317 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 OR51H1Q8NH63 302 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 OR4S2Q8NH73 311 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 OSR1Q8TAX0 266 aaPredicted RBP12.75□□□□□ -0.37
LRRC28-202ENST00000331450 ZFAND1Q8TCF1 268 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 RTBDNQ9BSG5 229 aaPredicted RBP12.75□□□□□ -0.37
LRRC28-202ENST00000331450 C19orf24Q9BVV8 132 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 C5orf66Q9H5L9 145 aa12.75□□□□□ -0.37
LRRC28-202ENST00000331450 LIN7CQ9NUP9 197 aaKnown RBP12.75□□□□□ -0.37
LRRC28-202ENST00000331450 RNF212BA8MTL3 300 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 RAMP3O60896 148 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 F2RP25116 425 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 RAG2P55895 527 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 PIGPP57054 158 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 IFITM3Q01628 133 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 CBX3Q13185 183 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 Q6ZS46 218 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 TBC1D26Q86UD7 250 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 TMEM158Q8WZ71 300 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 HARBI1Q96MB7 349 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 TSNAXQ99598 290 aaKnown RBP12.74□□□□□ -0.37
LRRC28-202ENST00000331450 C16orf95Q9H693 158 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 VSIG4Q9Y279 399 aa12.74□□□□□ -0.37
LRRC28-202ENST00000331450 LINC00854A0A1B0GVQ3 168 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 TMEM89A2RUT3 159 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 NCBP2LA6PVI3 153 aaKnown RBP12.73□□□□□ -0.37
LRRC28-202ENST00000331450 SRRM4A7MD48 611 aaKnown RBP12.73□□□□□ -0.37
LRRC28-202ENST00000331450 RRHO14718 337 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 VSIG10L2P0DP72 767 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 S100GP29377 79 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 LGALS7P47929 136 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 RPS16P62249 146 aaKnown RBP12.73□□□□□ -0.37
LRRC28-202ENST00000331450 PSG5Q15238 335 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 C5orf64Q2M2E5 130 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 ABCA11PQ4W5N1 156 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 SPAG16Q8N0X2 631 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 SLC25A21Q9BQT8 299 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-202ENST00000331450 PRSS22Q9GZN4 317 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 FAM212BQ9NTI7 297 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-202ENST00000331450 TBC1D24Q9ULP9 559 aa12.73□□□□□ -0.37
LRRC28-202ENST00000331450 SH2D7A6NKC9 451 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-202ENST00000331450 SHOXO15266 292 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 MPPED1O15442 326 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 LYRM1O43325 122 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 PEX14O75381 377 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 CRYGBP07316 175 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 CCR6P51684 374 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 RBMS2Q15434 407 aaKnown RBP12.72□□□□□ -0.37
LRRC28-202ENST00000331450 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 CCDC71LQ8N9Z2 235 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 OR4F5Q8NH21 305 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 LINC01006Q8NI28 216 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 CD300LFQ8TDQ1 290 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 TMEM230Q96A57 120 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 FBXL15Q9H469 300 aa12.72□□□□□ -0.37
LRRC28-202ENST00000331450 C14orf166Q9Y224 244 aaKnown RBP12.72□□□□□ -0.37
LRRC28-202ENST00000331450 CENPXA8MT69 81 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 H0Y980 276 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 SLC25A17O43808 307 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 NDUFB6O95139 128 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 HLA-DRB1P01911 266 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 UBE2KP61086 200 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 ASAH1Q13510 395 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 POU2AF1Q16633 256 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 POC5Q8NA72 575 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 SCGB3A2Q96PL1 93 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 RASL11BQ9BPW5 248 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 PLEKHA2Q9HB19 425 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 TPSG1Q9NRR2 321 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 KIAA1456Q9P272 454 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 COPZ2Q9P299 210 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 METTL1Q9UBP6 276 aaKnown RBP12.71□□□□□ -0.37
LRRC28-202ENST00000331450 MMP24Q9Y5R2 645 aa12.71□□□□□ -0.37
LRRC28-202ENST00000331450 ATRQ13535 2644 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms