RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 IGHG3P01860 377 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 SCGB1C2P0DMR2 95 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 MAS1LP35410 378 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 ISOC2Q96AB3 205 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 TMEM208Q9BTX3 173 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 C5orf66Q9H5L9 145 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 PXMP4Q9Y6I8 212 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 SCN3AQ9NY46 2000 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 ATG2BQ96BY7 2078 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 A0A0G2JK05 382 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 KBTBD11-OT1A0A1B0GTJ5 212 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 M0QZK8 103 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 GGCTO75223 188 aaKnown RBP9.7□□□□□ -0.86
COL4A5-201ENST00000328300 AMTP48728 403 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 IGKV1D-43A0A0B4J1Z2 117 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 BCL2P10415 239 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 NHLH1Q02575 133 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 NHLH2Q02577 135 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 FAM106AQ4KMX7 169 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 SSMEM1Q8WWF3 244 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 TNFRSF14Q92956 283 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 SSBP3Q9BWW4 388 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-201ENST00000328300 KCNAB3O43448 404 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 CIDEAO60543 219 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 OR2J3O76001 311 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 CD8AP01732 235 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 GLIPR1P48060 266 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 ERVS71-1P61550 626 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 TMEM255AQ5JRV8 349 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 MBNL2Q5VZF2 373 aaKnown RBP9.7□□□□□ -0.86
COL4A5-201ENST00000328300 CHD5Q8TDI0 1954 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 SPINK4O60575 86 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 PSG7Q13046 419 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 Q6ZN92 141 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 TPRX1Q8N7U7 411 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 GSX1Q9H4S2 264 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-201ENST00000328300 PRR13Q9NZ81 148 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 DPM3Q9P2X0 92 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 SRSF10O75494 262 aaKnown RBP9.69□□□□□ -0.86
COL4A5-201ENST00000328300 LOXL3P58215 753 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 LAMTOR1Q6IAA8 161 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 UNQ5815/PRO19632Q6UWF5 114 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 BPIFA4PQ86YQ2 179 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 SNRNP40Q96DI7 357 aaKnown RBP9.69□□□□□ -0.86
COL4A5-201ENST00000328300 UNC119Q13432 240 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 LRRC75BQ2VPJ9 315 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 DHRS11Q6UWP2 260 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 ZNF383Q8NA42 475 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 MRPL30Q8TCC3 161 aaKnown RBP9.69□□□□□ -0.86
COL4A5-201ENST00000328300 MSRB2Q9Y3D2 182 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 A0A1W2PPE3 182 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 C7orf77A4D0Y5 90 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 HSPB1P04792 205 aaKnown RBP9.69□□□□□ -0.86
COL4A5-201ENST00000328300 CRYGSP22914 178 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 REG1BP48304 166 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
COL4A5-201ENST00000328300 IFITM3Q01628 133 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 SAMD13Q5VXD3 122 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 DRAM1Q8N682 238 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 LINC01560Q8TB33 94 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 EEF1AKMT3Q96AZ1 226 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 VWA8A3KMH1 1905 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 ZNF98A6NK75 572 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 OR10J1P30954 320 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 ARTNQ5T4W7 220 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 RBPMS2Q6ZRY4 209 aaKnown RBP9.69□□□□□ -0.86
COL4A5-201ENST00000328300 WBP1Q96G27 269 aa9.69□□□□□ -0.86
COL4A5-201ENST00000328300 NPBWR2P48146 333 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 GAS1P54826 345 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 TMEM97Q5BJF2 176 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 NHLRC3Q5JS37 347 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 PET117Q6UWS5 81 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 GGNQ86UU5 652 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.86
COL4A5-201ENST00000328300 TCF19Q9Y242 345 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 RAXQ9Y2V3 346 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 FGF8P55075 233 aaPredicted RBP9.68□□□□□ -0.86
COL4A5-201ENST00000328300 HLA-DRB5Q30154 266 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 FAM90A9PA6NNJ1 464 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 CDRT15L2A8MXV6 281 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 ISLRO14498 428 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 S1PR2O95136 353 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 HKR1P10072 659 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 GCSHP23434 173 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 PPOXP50336 477 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 EFNB1P98172 346 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 ATP5G2Q06055 141 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 DCAF12L2Q5VW00 463 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 SPRR3Q9UBC9 169 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 OR5AL1P0C617 328 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 FAM157CP0CG43 387 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 UCP1P25874 307 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 ZNF818PQ6ZRF7 136 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 HILPDAQ9Y5L2 63 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 RBFOX2O43251 390 aaKnown RBP eCLIP9.68□□□□□ -0.864e-6■■■■□ 22.6
COL4A5-201ENST00000328300 PKIAP61925 76 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 FAM89BQ8N5H3 189 aa9.68□□□□□ -0.86
COL4A5-201ENST00000328300 C12orf77C9JDV5 145 aa9.67□□□□□ -0.86
COL4A5-201ENST00000328300 PAGE4O60829 102 aa9.67□□□□□ -0.86
COL4A5-201ENST00000328300 ZNF25P17030 456 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms