RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FAM166AQ6J272 317 aa13□□□□□ -0.33
VARS2-201ENST00000321897 CLDND2Q8NHS1 167 aa13□□□□□ -0.33
VARS2-201ENST00000321897 CSPG4Q6UVK1 2322 aa13□□□□□ -0.33
VARS2-201ENST00000321897 IGKV1-27A0A075B6S5 117 aa13□□□□□ -0.33
VARS2-201ENST00000321897 SYNGR3O43761 229 aa13□□□□□ -0.33
VARS2-201ENST00000321897 SELLP14151 372 aa13□□□□□ -0.33
VARS2-201ENST00000321897 F2RP25116 425 aa13□□□□□ -0.33
VARS2-201ENST00000321897 NUTF2P61970 127 aaKnown RBP13□□□□□ -0.33
VARS2-201ENST00000321897 SEBOXQ9HB31 216 aaPredicted RBP13□□□□□ -0.33
VARS2-201ENST00000321897 DCAF16Q9NXF7 216 aa13□□□□□ -0.33
VARS2-201ENST00000321897 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
VARS2-201ENST00000321897 IGKV1D-13A0A0B4J2D9 117 aa13□□□□□ -0.33
VARS2-201ENST00000321897 OR2H2O95918 312 aa13□□□□□ -0.33
VARS2-201ENST00000321897 IGHV2-5P01817 119 aa13□□□□□ -0.33
VARS2-201ENST00000321897 IGKV1-13P0DP09 117 aa13□□□□□ -0.33
VARS2-201ENST00000321897 ANAPC16Q96DE5 110 aa13□□□□□ -0.33
VARS2-201ENST00000321897 LRFN3Q9BTN0 628 aa13□□□□□ -0.33
VARS2-201ENST00000321897 VSIRQ9H7M9 311 aa13□□□□□ -0.33
VARS2-201ENST00000321897 ARFGEF3Q5TH69 2177 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 CSN3P07498 182 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 CEACAM21Q3KPI0 293 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 SPATA45Q537H7 98 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 SELENOHQ8IZQ5 122 aaKnown RBP12.99□□□□□ -0.33
VARS2-201ENST00000321897 OR5A2Q8NGI9 324 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 MOB3AQ96BX8 217 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 OR5B21A6NL26 309 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 CCL8P80075 99 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 HGFACQ04756 655 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 OR51G1Q8NGK1 321 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 CHRNA10Q9GZZ6 450 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 CELSR3Q9NYQ7 3312 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 ARHGAP21Q5T5U3 1957 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 TRAV17A0A0B4J275 112 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 CTXND1A0A1B0GTU2 59 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 A0A1B0GUS0 222 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 CD55P08174 381 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 OR5G3P0C626 314 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 OR10J4P0C629 311 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 FGF12P61328 243 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 TMEM147Q9BVK8 224 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 WASHC3Q9Y3C0 194 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 C2orf16Q68DN1 1984 aa12.99□□□□□ -0.33
VARS2-201ENST00000321897 J3QT63 122 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 RRP8O43159 456 aaKnown RBP12.98□□□□□ -0.33
VARS2-201ENST00000321897 IGHV3-48P01763 117 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 GLRX2Q9NS18 164 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 MPC1Q9Y5U8 109 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 CHD3Q12873 2000 aaKnown RBP12.98□□□□□ -0.33
VARS2-201ENST00000321897 HS3ST6Q96QI5 342 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 WDR61Q9GZS3 305 aaKnown RBP12.98□□□□□ -0.33
VARS2-201ENST00000321897 hCG_38984A0A1B0GV85 526 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 FBLL1A6NHQ2 334 aaKnown RBP12.98□□□□□ -0.33
VARS2-201ENST00000321897 DBX1A6NMT0 343 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 SSTR5P35346 364 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 C10orf128Q5T292 105 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 FADS6Q8N9I5 356 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 TAF15Q92804 592 aaKnown RBP eCLIP12.98□□□□□ -0.33
VARS2-201ENST00000321897 SDF2L1Q9HCN8 221 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.98□□□□□ -0.33
VARS2-201ENST00000321897 VPS13AQ96RL7 3174 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 LDLRAD4O15165 306 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 PGLYRP1O75594 196 aaPredicted RBP12.98□□□□□ -0.33
VARS2-201ENST00000321897 OR8I2Q8N0Y5 310 aa12.98□□□□□ -0.33
VARS2-201ENST00000321897 MRPL37Q9BZE1 423 aaKnown RBP12.98□□□□□ -0.33
VARS2-201ENST00000321897 TMPRSS2O15393 492 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 GNG4P50150 75 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 SRSF6Q13247 344 aaKnown RBP12.97□□□□□ -0.33
VARS2-201ENST00000321897 FXYD3Q14802 87 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 GATAD1Q8WUU5 269 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 LILRA1O75019 489 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 HES1Q14469 280 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 STUMQ69YW2 141 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 TMEM54Q969K7 222 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 TRGV8A0A0C4DH27 118 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 C1QTNF9BB2RNN3 333 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 SLC17A3O00476 420 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 GZMBP10144 247 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 ARL3P36405 182 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 FOXC1Q12948 553 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 ST6GALNAC6Q969X2 333 aa12.97□□□□□ -0.33
VARS2-201ENST00000321897 LAMA1P25391 3075 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 A0A1B0GU03 582 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 C9orf172C9J069 976 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 M0R2Z0 102 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 BMPR1BO00238 502 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 KBTBD11O94819 623 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 TRAT1Q6PIZ9 186 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 FDCSPQ8NFU4 85 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 OR4P4Q8NGL7 312 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 TMEM171Q8WVE6 324 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 PRB3Q04118 309 aaPredicted RBP12.96□□□□□ -0.33
VARS2-201ENST00000321897 Q0VFX4 171 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 SMIM15Q7Z3B0 74 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 TMEM256Q8N2U0 113 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 RBMXL3Q8N7X1 1067 aaKnown RBP12.96□□□□□ -0.33
VARS2-201ENST00000321897 OR10X1Q8NGY0 326 aa12.96□□□□□ -0.33
VARS2-201ENST00000321897 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.33
VARS2-201ENST00000321897 CISD1Q9NZ45 108 aaKnown RBP12.96□□□□□ -0.33
VARS2-201ENST00000321897 NUBP1P53384 320 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms