RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 DCAF16Q9NXF7 216 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 FBLN5Q9UBX5 448 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 REV3LO60673 3130 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 COX7A2P2O60397 106 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 CRYBA1P05813 215 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 PGA5P0DJD9 388 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 NPY1RP25929 384 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 TCL1AP56279 114 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 SPNS3Q6ZMD2 512 aa9.26□□□□□ -0.93
TOP3A-201ENST00000321105 FLYWCH2Q96CP2 140 aaKnown RBP9.26□□□□□ -0.93
TOP3A-201ENST00000321105 NUDT16L1Q9BRJ7 211 aaKnown RBP9.26□□□□□ -0.93
TOP3A-201ENST00000321105 H3BQ15 152 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 H3BTX0 84 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 RAB29O14966 203 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 PPP1R2P9O14990 202 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FLI1Q01543 452 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-201ENST00000321105 NCMAPQ5T1S8 102 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 MIC13Q5XKP0 118 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 ZNF645Q8N7E2 425 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 SNX22Q96L94 193 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 ZDHHC11Q9H8X9 412 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 CACFD1Q9UGQ2 172 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 ZNF320A2RRD8 509 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A10PA6NDY2 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A18PA6NE21 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A16PA6NEW6 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A20PA6NIJ5 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A8PA6NJQ4 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A7PA6NKC0 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A22PA8MWA6 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A12PA8MX19 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A5PA8MXJ8 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A23PA8MXZ1 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 H0Y8G0 127 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 SS18L1O75177 396 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A15PP0C7V4 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A13PP0C7W8 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A14PP0C7W9 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 FAM90A24PP0C7X0 464 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 TDGF1P13385 188 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 B2MP61769 119 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 DLK1P80370 383 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 ZNF90Q03938 601 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 TNFRSF9Q07011 255 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 VMA21Q3ZAQ7 101 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 LHFPL1Q86WI0 220 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 SAXO1Q8IYX7 474 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 CMTM2Q8TAZ6 248 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 ATPIF1Q9UII2 106 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 S4R3C0 116 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 ALPK3Q96L96 1907 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 IGHV3OR16-10A0A075B7F0 116 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 DLX1P56177 255 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 S100A12P80511 92 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 LINC00596Q86U02 117 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 GALNT14Q96FL9 552 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 LYRM2Q9NU23 88 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-201ENST00000321105 TMEM140Q9NV12 185 aa9.25□□□□□ -0.93
TOP3A-201ENST00000321105 NAV3Q8IVL0 2385 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 K7N7A8 449 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 MLNRO43193 412 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 SLC35B1P78383 322 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 ZNF474Q6S9Z5 364 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-201ENST00000321105 MUC15Q8N387 334 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 ZNF714Q96N38 554 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 QTRT1Q9BXR0 403 aaKnown RBP9.24□□□□□ -0.93
TOP3A-201ENST00000321105 ASCL3Q9NQ33 180 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 ZNRD1Q9P1U0 126 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 PRSS44E7EML9 344 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 DKK1O94907 266 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 CSRP1P21291 193 aaKnown RBP9.24□□□□□ -0.93
TOP3A-201ENST00000321105 PSG5Q15238 335 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 MMDQ15546 238 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 BATFQ16520 125 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 NRN1LQ496H8 165 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 KCNIP4Q6PIL6 250 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 LDLRAD3Q86YD5 345 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 NEUROG1Q92886 237 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 SFXN3Q9BWM7 321 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 HIVEP2P31629 2446 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 NUDT19A8MXV4 375 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 MRGPRGQ86SM5 289 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 RAB1BQ9H0U4 201 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 SH2D2AQ9NP31 389 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 PARP11Q9NR21 331 aa9.24□□□□□ -0.93
TOP3A-201ENST00000321105 IQCF6A8MYZ5 107 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 C11orf94C9JXX5 98 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 MBP02144 154 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 HLA-GP17693 338 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 GATA2P23769 480 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-201ENST00000321105 UCP1P25874 307 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 CD1BP29016 333 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 ERVFC1-1P60608 527 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 HERPUD1Q15011 391 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-201ENST00000321105 FAM57AQ8TBR7 257 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 RAB1CQ92928 201 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 DYSFO75923 2080 aa9.23□□□□□ -0.93
TOP3A-201ENST00000321105 SPP1P10451 314 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms