RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 BIVMQ86UB2 503 aa14.02□□□□□ -0.16
CLIP4-201ENST00000320081 ZIC4Q8N9L1 334 aa14.02□□□□□ -0.16
CLIP4-201ENST00000320081 HIST1H2BAQ96A08 127 aa14.02□□□□□ -0.16
CLIP4-201ENST00000320081 NPTNQ9Y639 398 aa14.02□□□□□ -0.16
CLIP4-201ENST00000320081 IGLV3-12A0A075B6K2 115 aa14.02□□□□□ -0.17
CLIP4-201ENST00000320081 C12orf77C9JDV5 145 aa14.02□□□□□ -0.17
CLIP4-201ENST00000320081 TGOLN2O43493 480 aa14.02□□□□□ -0.17
CLIP4-201ENST00000320081 PRDM14Q9GZV8 571 aa14.02□□□□□ -0.17
CLIP4-201ENST00000320081 SLC25A10Q9UBX3 287 aaPredicted RBP14.02□□□□□ -0.17
CLIP4-201ENST00000320081 NPIPB13A6NJU9 1138 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 SEC14L6B5MCN3 397 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 NPIPB4C9JG80 1138 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 E9PLN8 166 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 DANCRP0C864 163 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 KHDC3LQ587J8 217 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 ABLIM2Q6H8Q1 611 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 FAM222BQ8WU58 562 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 CYYR1Q96J86 154 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 VAMP8Q9BV40 100 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 TRPM7Q96QT4 1865 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 GATCO43716 136 aaKnown RBP14.01□□□□□ -0.17
CLIP4-201ENST00000320081 HOXA4Q00056 320 aaPredicted RBP14.01□□□□□ -0.17
CLIP4-201ENST00000320081 BCL2L2Q92843 193 aaPredicted RBP14.01□□□□□ -0.17
CLIP4-201ENST00000320081 ZNF785A8K8V0 405 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 TEPPQ6URK8 271 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 FGF11Q92914 225 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 CHRNA10Q9GZZ6 450 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 C17orf98A8MV24 154 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 CCL20P78556 96 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 TNFRSF9Q07011 255 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 FADS6Q8N9I5 356 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 OR8G5Q8NG78 346 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 S4R3C0 116 aa14.01□□□□□ -0.17
CLIP4-201ENST00000320081 GATA2P23769 480 aaPredicted RBP14□□□□□ -0.17
CLIP4-201ENST00000320081 LINC00205P59089 165 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 PNRC1Q12796 327 aaPredicted RBP14□□□□□ -0.17
CLIP4-201ENST00000320081 SRSF6Q13247 344 aaKnown RBP14□□□□□ -0.17
CLIP4-201ENST00000320081 MMDQ15546 238 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 SMIM15Q7Z3B0 74 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 SLC24A4Q8NFF2 622 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 WBP1Q96G27 269 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 TMUB1Q9BVT8 246 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 IGKV1-27A0A075B6S5 117 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 HELTA6NFD8 242 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 SLC25A17O43808 307 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 CECR9P0C854 216 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 ATP6V1FQ16864 119 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 GRIFINA4D1Z8 144 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 MGST3O14880 152 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 SRSF10O75494 262 aaKnown RBP14□□□□□ -0.17
CLIP4-201ENST00000320081 CD3EP07766 207 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 SUPT4H1P63272 117 aaKnown RBP14□□□□□ -0.17
CLIP4-201ENST00000320081 H1FOOQ8IZA3 346 aaPredicted RBP14□□□□□ -0.17
CLIP4-201ENST00000320081 WASHC3Q9Y3C0 194 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 OR51B2Q9Y5P1 312 aa14□□□□□ -0.17
CLIP4-201ENST00000320081 CA11O75493 328 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 TPPP2P59282 170 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 VN1R17PQ8TDU5 208 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 OR5P3Q8WZ94 311 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 RCC1LQ96I51 464 aaKnown RBP13.99□□□□□ -0.17
CLIP4-201ENST00000320081 NOL4LQ96MY1 436 aaPredicted RBP13.99□□□□□ -0.17
CLIP4-201ENST00000320081 NCOA6Q14686 2063 aaPredicted RBP13.99□□□□□ -0.17
CLIP4-201ENST00000320081 LILRA1O75019 489 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 KRTCAP3Q53RY4 240 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 PEAR1Q5VY43 1037 aaPredicted RBP13.99□□□□□ -0.17
CLIP4-201ENST00000320081 REPIN1Q9BWE0 567 aaKnown RBP13.99□□□□□ -0.17
CLIP4-201ENST00000320081 RRHO14718 337 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 SLC25A53Q5H9E4 307 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 OR13A1Q8NGR1 328 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 PLPPR1Q8TBJ4 325 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 SIRT7Q9NRC8 400 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 TMEM140Q9NV12 185 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 NAGKQ9UJ70 344 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 GBF1Q92538 1859 aa13.99□□□□□ -0.17
CLIP4-201ENST00000320081 ARL16Q0P5N6 197 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 VAMP3Q15836 100 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 GLRX2Q9NS18 164 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 IGHV3OR16-8A0A075B7F1 116 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 SELLP14151 372 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 FAM216BQ8N7L0 139 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 CALYQ9NYX4 217 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 PRR19A6NJB7 356 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 REG4Q9BYZ8 158 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 ZNF716A6NP11 495 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 PRR33A8MZF0 331 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 SMIM6P0DI80 62 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 MFAP2P55001 183 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 S100A7AQ86SG5 101 aa13.98□□□□□ -0.17
CLIP4-201ENST00000320081 A0A1W2PN81 502 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 LRRC3CA6NJW4 275 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 RAB29O14966 203 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 IQCJQ1A5X6 159 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 LINC00469Q8N7U9 141 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 DENND4CQ5VZ89 1909 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 QTRT1Q9BXR0 403 aaKnown RBP13.97□□□□□ -0.17
CLIP4-201ENST00000320081 ASCL3Q9NQ33 180 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 PLXNA3P51805 1871 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 PPIAL4EA0A075B759 164 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 PPIAL4DF5H284 164 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 OR4A8P0C604 315 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms