RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 FAM53AQ6NSI3 398 aaPredicted RBP8.87□□□□□ -0.99
COL3A1-202ENST00000317840 CYP2G1PQ6ZSU1 146 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 OR1P1Q8NH06 330 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 OR4A16Q8NH70 328 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 SARAFQ96BY9 339 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 PKIBQ9C010 78 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 ODAMA1E959 279 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 KIAA1324LA8MWY0 1029 aaPredicted RBP8.87□□□□□ -0.99
COL3A1-202ENST00000317840 FCGR3BO75015 233 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 TDGF1P13385 188 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 ERVK-16P61578 105 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 HOXA4Q00056 320 aaPredicted RBP8.87□□□□□ -0.99
COL3A1-202ENST00000317840 TFF3Q07654 80 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 SRSF7Q16629 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF585BQ52M93 769 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 ACSM6Q6P461 480 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 OR51G1Q8NGK1 321 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 CIB3Q96Q77 187 aaPredicted RBP8.87□□□□□ -0.99
COL3A1-202ENST00000317840 SRD5A3Q9H8P0 318 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 ABCA1O95477 2261 aa8.87□□□□□ -0.99
COL3A1-202ENST00000317840 TRAV38-1A0A0B4J264 116 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 MDFIC2A0A1B0GVS7 189 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 HBZP02008 142 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 LINC00205P59089 165 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 RPL23P62829 140 aaKnown RBP8.86□□□□□ -0.99
COL3A1-202ENST00000317840 HAPLN4Q86UW8 402 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 MSL2Q9HCI7 577 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 TMEM183AQ8IXX5 376 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 DEFB108BQ8NET1 73 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 GTF3AQ92664 365 aaKnown RBP8.86□□□□□ -0.99
COL3A1-202ENST00000317840 TLN1Q9Y490 2541 aaKnown RBP8.86□□□□□ -0.99
COL3A1-202ENST00000317840 TRBV24-1A0A075B6N3 115 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 IGKV3D-15A0A087WSY6 115 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 C17orf98A8MV24 154 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 SPINT2O43291 252 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 GPR12P47775 334 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 CD81P60033 236 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 P2RY6Q15077 328 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 TRAPPC1Q9Y5R8 145 aa8.86□□□□□ -0.99
COL3A1-202ENST00000317840 LRRC30A6NM36 301 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 C1QTNF9BB2RNN3 333 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 C12orf77C9JDV5 145 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 NDUFB4O95168 129 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 HRASP01112 189 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 IGKV1D-33P01593 117 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 IGKV1-33P01594 117 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 LMO1P25800 156 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 SSTR5P35346 364 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 MAS1LP35410 378 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF83P51522 516 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 ATP6V1FQ16864 119 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 KRTAP27-1Q3LI81 207 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 Q8NFD4 153 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 SPG11Q96JI7 2443 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 KITLGP21583 273 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 LRP11Q86VZ4 500 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF645Q8N7E2 425 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 C14orf144Q96I85 54 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 HIPK2Q9H2X6 1198 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 ENY2Q9NPA8 101 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 A0A1W2PNU3 283 aaPredicted RBP8.85□□□□□ -0.99
COL3A1-202ENST00000317840 M0R1B8 84 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 CISD2Q8N5K1 135 aaKnown RBP8.85□□□□□ -0.99
COL3A1-202ENST00000317840 PRDM13Q9H4Q3 707 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 TMEM242Q9NWH2 141 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 PIEZO1Q92508 2521 aa8.85□□□□□ -0.99
COL3A1-202ENST00000317840 TMEM250H0YL14 139 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 M0R1X1 148 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 PSPNO60542 156 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 RAB4BP61018 213 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 RPL30P62888 115 aaKnown RBP8.84□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF497Q6ZNH5 498 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 SSMEM1Q8WWF3 244 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 YPEL4Q96NS1 127 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 GCM1Q9NP62 436 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 TP53TG5Q9Y2B4 290 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 PLCE1Q9P212 2302 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 FAM90A26D6RGX4 464 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 AMBPP02760 352 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 RND2P52198 227 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 SELENOVP59797 346 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 GCSAMLQ5JQS6 135 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 NPCDR1Q9BY65 106 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 CHD8Q9HCK8 2581 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 OOEPA6NGQ2 149 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 ZNF891A8MT65 544 aaPredicted RBP8.84□□□□□ -0.99
COL3A1-202ENST00000317840 F6UZH7 168 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 MKRN2OSH3BPM6 223 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 Q6P435 159 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 REC114Q7Z4M0 266 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 SGMS2Q8NHU3 365 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 R3HDM4Q96D70 268 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 ANAPC16Q96DE5 110 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 WDYHV1Q96HA8 205 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 PROCRQ9UNN8 238 aa8.84□□□□□ -0.99
COL3A1-202ENST00000317840 IL18BPO95998 194 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 ZNF90Q03938 601 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 BATFQ16520 125 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms