RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 FOXC2Q99958 501 aa3.13□□□□□ -1.91
GEN1-201ENST00000317402 MAP1LC3CQ9BXW4 147 aa3.13□□□□□ -1.91
GEN1-201ENST00000317402 REG4Q9BYZ8 158 aa3.13□□□□□ -1.91
GEN1-201ENST00000317402 ULBP2Q9BZM5 246 aa3.13□□□□□ -1.91
GEN1-201ENST00000317402 AURKAIP1Q9NWT8 199 aaPredicted RBP3.13□□□□□ -1.91
GEN1-201ENST00000317402 WBP1LQ9NX94 342 aa3.13□□□□□ -1.91
GEN1-201ENST00000317402 GNG12Q9UBI6 72 aa3.13□□□□□ -1.91
GEN1-201ENST00000317402 UFC1Q9Y3C8 167 aa3.13□□□□□ -1.91
GEN1-201ENST00000317402 A4D1N5 150 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 GSTZ1O43708 216 aaPredicted RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 NPIPB7O75200 414 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 WNT5AP41221 380 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 MTCP1P56278 107 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 MYBPHQ13203 477 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 PMCHL1Q16048 86 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 LGI3Q8N145 548 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 DTWD2Q8NBA8 298 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 MARCH1Q8TCQ1 289 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 FAM71F1Q96KD3 344 aaPredicted RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 POM121L2Q96KW2 1035 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 SF3B5Q9BWJ5 86 aaKnown RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 KIR3DX1Q9H7L2 352 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 ANXA10Q9UJ72 324 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 MRPS28Q9Y2Q9 187 aaKnown RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 LOC105371242A0A075B767 164 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 PPIAL4CA0A0B4J2A2 164 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 OR2J3O76001 311 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 ACTL6AO96019 429 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 PPIAL4GP0DN37 164 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 MMP9P14780 707 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 CYB561P49447 251 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 UBE2G1P62253 170 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 GAGE2BQ13066 116 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 OR1Q1Q15612 314 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 GAGE2EQ4V326 116 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 GUSBP11Q6P575 273 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 UNQ5815/PRO19632Q6UWF5 114 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 MOB3CQ70IA8 216 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 HIST3H2BBQ8N257 126 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 OR10G3Q8NGC4 313 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 OR5D13Q8NGL4 314 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 BAHD1Q8TBE0 780 aaPredicted RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 RNASE8Q8TDE3 154 aaKnown RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 ADTRPQ96IZ2 230 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 PGLYRP3Q96LB9 341 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 RBM24Q9BX46 236 aaKnown RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 PARP11Q9NR21 331 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 GAGE2DQ9UEU5 116 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 B9D1Q9UPM9 204 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 HS3ST3A1Q9Y663 406 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 MUC22E2RYF6 1773 aaPredicted RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 A0A0G2JMM0 328 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 A0A1W2PPB8 328 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 CRYM-AS1A6NIL9 109 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 KIR3DP1A8MWS1 328 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 J3QW42 95 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 SP9P0CG40 484 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 CRYBA4P53673 196 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 IKZF1Q13422 519 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 C5orf47Q569G3 176 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 DOLPP1Q86YN1 238 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 OR2T6Q8NHC8 308 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 IGKV1D-42A0A075B6H8 117 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 A8MWP6 167 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 SSSCA1O60232 199 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 APOMO95445 188 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 CD1AP06126 327 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 HLA-GP17693 338 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 S100A4P26447 101 aaKnown RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 ZNF345Q14585 488 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 PRTGQ2VWP7 1150 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 OR10V1Q8NGI7 309 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 FGFBP3Q8TAT2 258 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 SPSB1Q96BD6 273 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 LIME1Q9H400 295 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 ADGRL4Q9HBW9 690 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 COLQQ9Y215 455 aaPredicted RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 SIRPB1O00241 398 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 OGG1O15527 345 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 SPINK4O60575 86 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 CCL4P13236 92 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 COX5AP20674 150 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 KIR2DL1P43626 348 aaPredicted RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 LINC01559Q495D7 138 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 MRGPREQ86SM8 312 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 OR10S1Q8NGN2 331 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 PRSS50Q9UI38 385 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 TBL2Q9Y4P3 447 aaKnown RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 CHST1O43916 411 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 TIMM8AO60220 97 aaPredicted RBP3.12□□□□□ -1.91
GEN1-201ENST00000317402 S1PR2O95136 353 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 CD3DP04234 171 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 ERGP11308 486 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 HERVK_113P61574 105 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 IL13RA2Q14627 380 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 GFI1BQ5VTD9 330 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 SLC36A1Q7Z2H8 476 aa3.12□□□□□ -1.91
GEN1-201ENST00000317402 ARIH2OSQ8N7S6 290 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms