RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 FAM222BQ8WU58 562 aa11.34□□□□□ -0.59
SNED1-201ENST00000310397 SCNM1Q9BWG6 230 aa11.34□□□□□ -0.59
SNED1-201ENST00000310397 SH2D7A6NKC9 451 aaPredicted RBP11.34□□□□□ -0.59
SNED1-201ENST00000310397 HLA-DRB1P01911 266 aa11.34□□□□□ -0.59
SNED1-201ENST00000310397 OR4A8P0C604 315 aa11.34□□□□□ -0.59
SNED1-201ENST00000310397 MC5RP33032 325 aa11.34□□□□□ -0.59
SNED1-201ENST00000310397 PTGDSP41222 190 aa11.34□□□□□ -0.59
SNED1-201ENST00000310397 KIR2DL2P43627 348 aaPredicted RBP11.34□□□□□ -0.59
SNED1-201ENST00000310397 C2orf68Q2NKX9 166 aa11.34□□□□□ -0.59
SNED1-201ENST00000310397 OR2H2O95918 312 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 ZNF137PP52743 207 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 WDR90Q96KV7 1748 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 HINT1P49773 126 aaPredicted RBP11.33□□□□□ -0.6
SNED1-201ENST00000310397 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 LINC00869P0C866 280 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 SOX8P57073 446 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 USF3Q68DE3 2245 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 SFXN3Q9BWM7 321 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 TRAV39A0A0B4J263 110 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 TWIST1Q15672 202 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 GCSAMQ8N6F7 178 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 LTBP4Q8N2S1 1624 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 DIRC2Q96SL1 478 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 DNAJC4Q9NNZ3 241 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 RLFQ13129 1914 aa11.33□□□□□ -0.6
SNED1-201ENST00000310397 CALHM1Q8IU99 346 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 SCARF2Q96GP6 870 aaPredicted RBP11.32□□□□□ -0.6
SNED1-201ENST00000310397 CRISPLD2Q9H0B8 497 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 CBLN4Q9NTU7 201 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 KLK10O43240 276 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 CD40P25942 277 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 IGHV4-34P06331 123 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 CKS2P33552 79 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 RPL8P62917 257 aaKnown RBP11.32□□□□□ -0.6
SNED1-201ENST00000310397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 COA4Q9NYJ1 87 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 OR4C46A6NHA9 309 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 AREGP15514 252 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 TCTAP57738 103 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 OR8B3Q8NGG8 313 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 OR8B2Q96RD0 313 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 RPRMQ9NS64 109 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 DLL3Q9NYJ7 618 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 DNASE2O00115 360 aaPredicted RBP11.32□□□□□ -0.6
SNED1-201ENST00000310397 UNC119Q13432 240 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 COX5BP10606 129 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 BTCP35070 178 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 TMEM30BQ3MIR4 351 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 FAM216AQ8WUB2 273 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 MS4A5Q9H3V2 200 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 SLC25A10Q9UBX3 287 aaPredicted RBP11.32□□□□□ -0.6
SNED1-201ENST00000310397 LOC389332A0A1B0GUA5 103 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 M0R3E3 92 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 MPV17P39210 176 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 UCP2P55851 309 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 MTURNQ8N3F0 131 aa11.32□□□□□ -0.6
SNED1-201ENST00000310397 APOBEC4Q8WW27 367 aaKnown RBP11.32□□□□□ -0.6
SNED1-201ENST00000310397 C4orf51C9J302 202 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 H3BVH4 76 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 SRIP30626 198 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 SPANXN1Q5VSR9 72 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 CCDC144NLQ6NUI1 221 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 RCC1LQ96I51 464 aaKnown RBP11.31□□□□□ -0.6
SNED1-201ENST00000310397 SLC22A18ASQ8N1D0 253 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 CLEC5AQ9NY25 188 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 ASPHD2Q6ICH7 369 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 TRAV9-1A0A075B6T8 112 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 DPRXA6NFQ7 191 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 THY1P04216 161 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 HOXA5P20719 270 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 CHRNA10Q9GZZ6 450 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 CA7P43166 264 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 NUBP1P53384 320 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 LRRC75BQ2VPJ9 315 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 WFIKKN1Q96NZ8 548 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 TMUB1Q9BVT8 246 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 TSPAN7P41732 249 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 MRPL32Q9BYC8 188 aaKnown RBP11.31□□□□□ -0.6
SNED1-201ENST00000310397 ABCA4P78363 2273 aa11.31□□□□□ -0.6
SNED1-201ENST00000310397 TRBV23-1A0A0A0MS06 115 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 RNF222A6NCQ9 220 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 CD3EP07766 207 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 PCP4P48539 62 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
SNED1-201ENST00000310397 P2RY6Q15077 328 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 DLL1O00548 723 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 RBPMS2Q6ZRY4 209 aaKnown RBP11.3□□□□□ -0.6
SNED1-201ENST00000310397 C1orf210Q8IVY1 113 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 COL4A5P29400 1685 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 B4E171 279 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 SOD3P08294 240 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 ZNF788Q6ZQV5 615 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 ZNF488Q96MN9 340 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 GUCD1Q96NT3 240 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms