RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 CDC42EP2O14613 210 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 CELA2BP08218 269 aaPredicted RBP11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 CA11O75493 328 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 ST6GAL2Q96JF0 529 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 TMEM42Q69YG0 159 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 DOCK3Q8IZD9 2030 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 PNLIPP16233 465 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 TMEM92Q6UXU6 159 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 ASCL4Q6XD76 172 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 RGPD3A6NKT7 1758 aaPredicted RBP11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 LEPROTL1O95214 131 aa11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 IGFBP6P24592 240 aaPredicted RBP11.15□□□□□ -0.62
SPTBN2-201ENST00000309996 ATAD5Q96QE3 1844 aa11.15□□□□□ -0.63
SPTBN2-201ENST00000309996 PAPPA2Q9BXP8 1791 aa11.15□□□□□ -0.63
SPTBN2-201ENST00000309996 ASPDHA6ND91 283 aa11.15□□□□□ -0.63
SPTBN2-201ENST00000309996 CYB5R3P00387 301 aaPredicted RBP11.15□□□□□ -0.63
SPTBN2-201ENST00000309996 RPS20P60866 119 aaKnown RBP11.15□□□□□ -0.63
SPTBN2-201ENST00000309996 NDUFA2O43678 99 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 LIPFP07098 398 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 CXCL10P02778 98 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 HDHD3Q9BSH5 251 aaPredicted RBP11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 COLQQ9Y215 455 aaPredicted RBP11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 TCF20Q9UGU0 1960 aaKnown RBP11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 A0A1W2PQD3 144 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 EFNB2P52799 333 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 PLPPR5Q32ZL2 321 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 ZNF645Q8N7E2 425 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 LINC01465Q8N7H1 131 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 YBX2Q9Y2T7 364 aaKnown RBP11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 FXYD1O00168 92 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 CXCL3P19876 107 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 MTURNQ8N3F0 131 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 AMY1AP04745 511 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 ALX4Q9H161 411 aaPredicted RBP11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 CEP250Q9BV73 2442 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 OGG1O15527 345 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 NDUFB4O95168 129 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 LINC00869P0C866 280 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 LIFP15018 202 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 ATP6V0CP27449 155 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 OR5AN1Q8NGI8 311 aa11.14□□□□□ -0.63
SPTBN2-201ENST00000309996 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 CEACAM8P31997 349 aaPredicted RBP11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 SNAI3Q3KNW1 292 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 LDLRAD2Q5SZI1 272 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 CHST5Q9GZS9 411 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 SERF2P84101 59 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 PARD6GQ9BYG4 376 aaPredicted RBP11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 TMEM30AQ9NV96 361 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 MT-ND6P03923 174 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 RPL8P62917 257 aaKnown RBP11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 DMKNQ6E0U4 476 aaPredicted RBP11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 CYB561D1Q8N8Q1 229 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 CST9LQ9H4G1 147 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 MPDZO75970 2070 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 ASAH2BP0C7U1 165 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 CTGFP29279 349 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 C8orf46Q8TAG6 207 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 USP54Q70EL1 1684 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 TRGV4A0A0C4DH28 118 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 CCL3P10147 92 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 BCL2P10415 239 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 UCN2Q96RP3 112 aa11.13□□□□□ -0.63
SPTBN2-201ENST00000309996 PRR33A8MZF0 331 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 NKX2-8O15522 239 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 UCP2P55851 309 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 MGAT2Q10469 447 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 TCF24Q7RTU0 167 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 ATG4DQ86TL0 474 aaPredicted RBP11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 SSBP3Q9BWW4 388 aaPredicted RBP11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 CGB3P0DN86 165 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 IGLV3-16A0A075B6K0 115 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 RND2P52198 227 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.12□□□□□ -0.634e-8■■□□□ 12.2
SPTBN2-201ENST00000309996 SEC11BP0C7V7 166 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 FOLR2P14207 255 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 C11orf44Q8N8P7 122 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 LINC01560Q8TB33 94 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 EFNB1P98172 346 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 TTC9CQ8N5M4 171 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 SMDT1Q9H4I9 107 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 UQCR10Q9UDW1 63 aa11.12□□□□□ -0.63
SPTBN2-201ENST00000309996 IGHV1-69-2A0A0G2JMI3 117 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 FOXI3A8MTJ6 420 aaPredicted RBP11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 TMEM250H0YL14 139 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 ZNF506Q5JVG8 444 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 OR11H7Q8NGC8 314 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 MRPL18Q9H0U6 180 aaKnown RBP11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 FAM60AQ9NP50 221 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 IGHV3-49A0A0A0MS15 119 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms