RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FAM157AC9JC47 383 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 M0R1W7 72 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 NDUFS8O00217 210 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 FCGR3BO75015 233 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 IGLV1-47P01700 117 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 EPHA1P21709 976 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 G6PCP35575 357 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 S100A10P60903 97 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 HLA-DRB5Q30154 266 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 HCP5Q6MZN7 132 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 FOXRED2Q8IWF2 684 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 OR10X1Q8NGY0 326 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 OR1S1Q8NH92 325 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 ST6GALNAC6Q969X2 333 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 S1PR3Q99500 378 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 MRPL20Q9BYC9 149 aaKnown RBP5.66□□□□□ -1.5
PTCD2-201ENST00000308077 SIRT7Q9NRC8 400 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 MMP26Q9NRE1 261 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 TNFSF18Q9UNG2 199 aa5.66□□□□□ -1.5
PTCD2-201ENST00000308077 CSMD2Q7Z408 3487 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 IGHV2-70DA0A0C4DH43 119 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 RNF222A6NCQ9 220 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 K7EPK0 472 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 ENSAO43768 121 aaKnown RBP5.65□□□□□ -1.5
PTCD2-201ENST00000308077 PITX3O75364 302 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 KRASP01116 189 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 COX7A1P24310 79 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 REG1BP48304 166 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 THBS3P49746 956 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF137PP52743 207 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 AKR1C2P52895 323 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 KLRD1Q13241 179 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 OXLD1Q5BKU9 147 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 PRSS54Q6PEW0 395 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 TMEM65Q6PI78 240 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 ZNF546Q86UE3 836 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 PNKDQ8N490 385 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 FAM71E2Q8N5Q1 922 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 OR4P4Q8NGL7 312 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 THAP6Q8TBB0 222 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 TNFRSF14Q92956 283 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 RRNAD1Q96FB5 475 aaKnown RBP5.65□□□□□ -1.5
PTCD2-201ENST00000308077 SPIN2AQ99865 258 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 SPIN2BQ9BPZ2 258 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 CLEC7AQ9BXN2 247 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 SLA2Q9H6Q3 261 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 CACNG5Q9UF02 275 aa5.65□□□□□ -1.5
PTCD2-201ENST00000308077 PAIP2BQ9ULR5 123 aaKnown RBP5.65□□□□□ -1.5
PTCD2-201ENST00000308077 RCL1Q9Y2P8 373 aaKnown RBP5.65□□□□□ -1.5
PTCD2-201ENST00000308077 LSM5Q9Y4Y9 91 aaKnown RBP5.65□□□□□ -1.5
PTCD2-201ENST00000308077 A0A1B0GU03 582 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 L7N2F9 121 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 TOR1AO14656 332 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 RBFOX2O43251 390 aaKnown RBP eCLIP5.65□□□□□ -1.51
PTCD2-201ENST00000308077 DEDDO75618 318 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 NXPH3O95157 252 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 HPRT1P00492 218 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 SLC25A6P12236 298 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 FOSL1P15407 271 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 KIR2DS2P43631 304 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 OPCMLQ14982 345 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 MIDNQ504T8 468 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 CXorf66Q5JRM2 361 aaPredicted RBP5.65□□□□□ -1.51
PTCD2-201ENST00000308077 LDLRAD2Q5SZI1 272 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 FAM71F2Q6NXP2 309 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 VMO1Q7Z5L0 202 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 KIR3DL3Q8N743 410 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 DMBX1Q8NFW5 382 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 RNASE11Q8TAA1 199 aaKnown RBP5.65□□□□□ -1.51
PTCD2-201ENST00000308077 CD300LFQ8TDQ1 290 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 PCNPQ8WW12 178 aaKnown RBP5.65□□□□□ -1.51
PTCD2-201ENST00000308077 DCUN1D4Q92564 292 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 TMEM186Q96B77 213 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 ADTRPQ96IZ2 230 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 NABP2Q9BQ15 211 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 GON7Q9BXV9 100 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 MFFQ9GZY8 342 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 SIRPDQ9H106 197 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 C11orf1Q9H5F2 150 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 PLEKHA2Q9HB19 425 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 POLR3KQ9Y2Y1 108 aaPredicted RBP5.65□□□□□ -1.51
PTCD2-201ENST00000308077 PRELID3BQ9Y3B1 194 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 MMP24Q9Y5R2 645 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 POMT1Q9Y6A1 747 aa5.65□□□□□ -1.51
PTCD2-201ENST00000308077 hCG_1809904A0A1W2PP81 198 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 A0A1W2PPE2 198 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 A0A1W2PR64 198 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 A0A1W2PRV1 198 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 MSGN1A6NI15 193 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 MARCH11A6NNE9 402 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 H0YJW9 148 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 BUB1B-PAK6H3BSN5 160 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 CRYZL1O95825 349 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 IGKV1-16P04430 117 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 MMP9P14780 707 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 PRTN3P24158 256 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 NKX2-1P43699 371 aaPredicted RBP5.64□□□□□ -1.51
PTCD2-201ENST00000308077 AP2S1P53680 142 aaPredicted RBP5.64□□□□□ -1.51
PTCD2-201ENST00000308077 POLR2GP62487 172 aaKnown RBP eCLIP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms