RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 CBLN1P23435 193 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 GCHFRP30047 84 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 COMPP49747 757 aaPredicted RBP10.99□□□□□ -0.65
COL3A1-201ENST00000304636 RPL31P62899 125 aaKnown RBP10.99□□□□□ -0.65
COL3A1-201ENST00000304636 TWIST1Q15672 202 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 SLC25A10Q9UBX3 287 aaPredicted RBP10.99□□□□□ -0.65
COL3A1-201ENST00000304636 CDX2Q99626 313 aaPredicted RBP10.99□□□□□ -0.65
COL3A1-201ENST00000304636 ANKRD36A6QL64 1941 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 H3BVH4 76 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 CELA2AP08217 269 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 SLC25A28Q96A46 364 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 OR8B2Q96RD0 313 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 C1RLQ9NZP8 487 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 TMEM238LA0A1B0GVL6 79 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 FBLL1A6NHQ2 334 aaKnown RBP10.99□□□□□ -0.65
COL3A1-201ENST00000304636 A6NJY4 79 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 RPL8P62917 257 aaKnown RBP10.99□□□□□ -0.65
COL3A1-201ENST00000304636 NPCDR1Q9BY65 106 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 FOXJ2Q9P0K8 574 aa10.99□□□□□ -0.65
COL3A1-201ENST00000304636 CALHM1Q8IU99 346 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 PGLYRP4Q96LB8 373 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 JPT1Q9UK76 154 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 DLX1P56177 255 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
COL3A1-201ENST00000304636 IL36BQ9NZH7 164 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 CRXO43186 299 aaPredicted RBP10.98□□□□□ -0.65
COL3A1-201ENST00000304636 NPIPB7O75200 414 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 MC5RP33032 325 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 RPL27AP46776 148 aaKnown RBP10.98□□□□□ -0.65
COL3A1-201ENST00000304636 REG1BP48304 166 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 NDUFAF3Q9BU61 184 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 REG4Q9BYZ8 158 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 RAB1BQ9H0U4 201 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 HSPB7Q9UBY9 170 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 SH2D7A6NKC9 451 aaPredicted RBP10.98□□□□□ -0.65
COL3A1-201ENST00000304636 LYPD3O95274 346 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 RNF224P0DH78 156 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 TCF19Q9Y242 345 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 ZNF714Q96N38 554 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 GFI1Q99684 422 aa10.98□□□□□ -0.65
COL3A1-201ENST00000304636 LTBP4Q8N2S1 1624 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 IGHV3-21A0A0B4J1V1 117 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 ODAMA1E959 279 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 B4E171 279 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 H0YIZ8 118 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 APELAP0DMC3 54 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 CKS2P33552 79 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 TSPAN7P41732 249 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 CENPWQ5EE01 88 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 STPG3Q8N7X2 389 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 SRXN1Q9BYN0 137 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 IGKV1D-43A0A0B4J1Z2 117 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 PTGDSP41222 190 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 OR10AG1Q8NH19 301 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 C18orf12Q96KH6 178 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 NABP2Q9BQ15 211 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 TMEM74BQ9NUR3 256 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 CD3EP07766 207 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 TCTAP57738 103 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 ICAM4Q14773 271 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 RTP5Q14D33 572 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 SPANXN1Q5VSR9 72 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 GUCD1Q96NT3 240 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 CHRNA10Q9GZZ6 450 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 AUP1Q9Y679 476 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 SIPA1L1O43166 1804 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 C17orf51A8MQB3 221 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 FGF5P12034 268 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 EGR1P18146 543 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 ATP5IP56385 69 aaPredicted RBP10.97□□□□□ -0.65
COL3A1-201ENST00000304636 ZNF826PQ6ZT77 177 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 TMEM56-RWDD3S4R434 201 aa10.97□□□□□ -0.65
COL3A1-201ENST00000304636 DICER1Q9UPY3 1922 aaKnown RBP10.97□□□□□ -0.65
COL3A1-201ENST00000304636 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 SMRP1Q8NCR6 262 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 OR5P3Q8WZ94 311 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 MS4A5Q9H3V2 200 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 TNFRSF19Q9NS68 423 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 WNK3Q9BYP7 1800 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 CD5P06127 495 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 SNRPCP09234 159 aaKnown RBP10.96□□□□□ -0.65
COL3A1-201ENST00000304636 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 ABHD12Q8N2K0 398 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 CALYQ9NYX4 217 aa10.96□□□□□ -0.65
COL3A1-201ENST00000304636 PPIAL4EA0A075B759 164 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 PPIAL4DF5H284 164 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 MGPP08493 103 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 PPIAL4FP0DN26 164 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 SSTR5P35346 364 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 CA7P43166 264 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 ZNF146Q15072 292 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 PPIAL4AQ9Y536 164 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 COLCA2A8K830 154 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 KLK10O43240 276 aa10.96□□□□□ -0.66
COL3A1-201ENST00000304636 MMDQ15546 238 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms