RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 HSD17B11Q8NBQ5 300 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 OR5C1Q8NGR4 320 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 OR4A16Q8NH70 328 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 BSCL2Q96G97 398 aaPredicted RBP11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 COA4Q9NYJ1 87 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 CEBPZOSA8MTT3 80 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 ZNF705EA8MWA4 302 aaPredicted RBP11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 FAM90A26D6RGX4 464 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 UBE2KP61086 200 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 SPANXN5Q5MJ07 72 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 UTF1Q5T230 341 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 CLCC1Q96S66 551 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 WSB1Q9Y6I7 421 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 IFNA17P01571 189 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 NQO2P16083 231 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 SLC25A48Q6ZT89 311 aaKnown RBP11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 UBAC2Q8NBM4 344 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 OR1S2Q8NGQ3 325 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 MIOXQ9UGB7 285 aa11.93□□□□□ -0.5
SHCBP1-201ENST00000303383 TNFRSF13BO14836 293 aaPredicted RBP11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 TNFRSF9Q07011 255 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 TMEM267Q0VDI3 215 aaPredicted RBP11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 GAB2Q9UQC2 676 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 MALRD1Q5VYJ5 2156 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 RBFOX2O43251 390 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■□□□ 13.2
SHCBP1-201ENST00000303383 PROP1O75360 226 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 CDKN1AP38936 164 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 DYNLT3P51808 116 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 RTL8BQ17RB0 113 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 NUP50Q9UKX7 468 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 C19orf84I3L1E1 186 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 IGHV2-70P01814 119 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 BRWD1-AS2P59051 145 aa11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 NEIL1Q96FI4 390 aaPredicted RBP11.92□□□□□ -0.5
SHCBP1-201ENST00000303383 H7C2Y5 167 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 TMEM50AO95807 157 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 PRH1P02810 166 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 AKAP6Q13023 2319 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 RBKSQ9H477 322 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 IFNA5P01569 189 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 DANCRP0C864 163 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 SULT1A1P50225 295 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 HBG1P69891 147 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 HBG2P69892 147 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 SLC35D1Q9NTN3 355 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 hCG_1809904A0A1W2PP81 198 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 A0A1W2PPE2 198 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 A0A1W2PR64 198 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 A0A1W2PRV1 198 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 GPR37O15354 613 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 APOA2P02652 100 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 METTL15P1P0C7V9 234 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 OR2B8PP59922 312 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 C11orf71Q6IPW1 123 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 DTX2Q86UW9 622 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 VKORC1L1Q8N0U8 176 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 WFDC1Q9HC57 220 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 PPP1R14DQ9NXH3 145 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 ZNRD1Q9P1U0 126 aa11.91□□□□□ -0.5
SHCBP1-201ENST00000303383 DFFBO76075 338 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 HRASP01112 189 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 AANATQ16613 207 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 TMEM155Q4W5P6 130 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 SMIM8Q96KF7 97 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 C11orf1Q9H5F2 150 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 FCN3O75636 299 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 GNB2P62879 340 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 S100A12P80511 92 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 CHODLQ9H9P2 273 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 IGSF10Q6WRI0 2623 aa11.9□□□□□ -0.5
SHCBP1-201ENST00000303383 TRAV20A0A0B4J274 112 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 PPIAL4CA0A0B4J2A2 164 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 PPIAL4GP0DN37 164 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 IL3RAP26951 378 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 PCP4P48539 62 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 PAX9P55771 341 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 SPINK9Q5DT21 86 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 DTD1Q8TEA8 209 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 HSPB7Q9UBY9 170 aa11.9□□□□□ -0.51
SHCBP1-201ENST00000303383 A6NNC1 897 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 TXNL1O43396 289 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 ABHD12Q8N2K0 398 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 OR9G1Q8NH87 305 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 SCGB1C1Q8TD33 95 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 RHOVQ96L33 236 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 TMEM140Q9NV12 185 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 MED9Q9NWA0 146 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 KIAA1324LA8MWY0 1029 aaPredicted RBP11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 PRB1P04280 392 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 IGHV1-8P0DP01 117 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 GPR6P46095 362 aaPredicted RBP11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 REG1BP48304 166 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 TAS2R30P59541 319 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 BLOC1S1P78537 153 aa11.89□□□□□ -0.51
SHCBP1-201ENST00000303383 OR8G2PQ6IF36 304 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms